3KVP

crystal structure of uncharacterized protein ymzc precursor from bacillus subtilis, northeast structural genomics consortium target sr378a

• Total interactions analyzed: 15
• Total true interactions: 15
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 72
  • Norm. En. per Res.: -4.8082
• Hub Node: A(5)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-0.2737	-0.2737	9	0	0	84	0	0	1
A-C	0.0	0.0	-0.1519	-0.1519	10	0	0	66	0	0	1
A-D	-47.0859	-47.2624	-251.844	-346.1922	72	14	10	9488	6	46	49
A-E	0.0	0.0	-0.0063	-0.0063	2	0	0	6	0	0	0
A-F	-2.6326	-12.8132	-198.273	-213.7189	63	15	8	7771	1	32	34
B-C	0.0	0.0	-0.2367	-0.2367	10	0	0	73	0	0	1
B-D	0.0	0.0	-0.0064	-0.0064	2	0	0	6	0	0	0
B-E	-28.2185	-20.2193	-186.895	-235.3327	63	10	7	7598	1	34	31
B-F	-21.4246	-25.8661	-200.877	-248.1677	62	5	7	7470	1	29	27
C-D	-18.5421	8.0965	-200.626	-211.0716	66	17	9	8186	2	36	35
C-E	-32.9327	-25.3034	-202.06	-260.2962	63	23	8	8427	2	34	33
C-F	0.0	0.0	-0.0108	-0.0108	4	0	0	11	0	0	0
D-E	0.0	0.0	-0.1293	-0.1293	10	0	0	52	0	0	1
D-F	0.0	0.0	-0.32	-0.32	11	0	0	83	0	1	1
E-F	0.0	0.0	-0.1367	-0.1367	10	0	0	55	0	0	1

Interface residues

• A-B: GLN21A, GLN21B, PHE25A, PRO20A, PRO26A, PRO26B, SER24B, THR23A, THR23B
• A-C: GLN21A, GLN21C, PHE25C, PRO22A, PRO26A, PRO26C, SER24A, SER24C, THR23A, THR23C
• A-D: ALA59D, ARG49A, ASN30A, ASN30D, ASN46A, ASN50A, ASP37D, ASP60D, ASP61D, GLN21A, GLN21D, GLU28A, GLU28D, GLU36A, GLU36D, GLU44A, GLU44D, GLU47A, GLU51A, GLU57A, GLU57D, GLU62D, GLU64D, GLU66D, GLY33A, GLY33D, GLY38D, HIS29A, HIS29D, HIS31A, HIS31D, HIS67D, HIS68D, ILE40D, ILE42A, ILE42D, LEU27A, LEU27D, LEU54A, LEU54D, LEU63D, LEU65D, LYS41A, LYS41D, LYS53A, LYS55A, LYS55D, LYS56A, LYS56D, PHE25A, PHE25D, PHE32A, PHE32D, PRO20A, PRO22A, PRO22D, PRO26A, PRO26D, SER24A, SER24D, SER48A, THR23A, THR23D, TYR39A, TYR43A, TYR43D, TYR45A, TYR58A, TYR58D, VAL34A, VAL34D, VAL52A
• A-E: PRO26A, PRO26E
• A-F: ALA59A, ARG49F, ASN30A, ASN30F, ASN46F, ASN50F, ASP37A, ASP60A, ASP61A, GLN21A, GLN21F, GLU28A, GLU28F, GLU36A, GLU36F, GLU44A, GLU44F, GLU47F, GLU51F, GLU57A, GLU57F, GLU62A, GLY33A, GLY33F, GLY38A, HIS29A, HIS29F, HIS31A, HIS31F, ILE40A, ILE42A, LEU27A, LEU27F, LEU54A, LEU54F, LYS41A, LYS41F, LYS53F, LYS55A, LYS55F, LYS56A, PHE25A, PHE25F, PHE32A, PHE32F, PRO20A, PRO20F, PRO22A, PRO22F, PRO26A, PRO26F, SER24A, SER24F, SER48F, THR23A, THR23F, TYR43A, TYR43F, TYR45F, TYR58A, VAL34A, VAL34F, VAL52F
• B-C: GLN21B, GLN21C, PHE25B, PRO22C, PRO26B, PRO26C, SER24B, SER24C, THR23B, THR23C
• B-D: PRO26B, PRO26D
• B-E: ALA59B, ARG49E, ASN30B, ASN30E, ASN46E, ASN50E, ASP37B, ASP60B, ASP61B, GLN21B, GLN21E, GLU28B, GLU28E, GLU36B, GLU36E, GLU44B, GLU44E, GLU47E, GLU51E, GLU57B, GLU57E, GLU62B, GLY33B, GLY33E, GLY38B, HIS29B, HIS29E, HIS31B, HIS31E, ILE40B, ILE42B, LEU27B, LEU27E, LEU54B, LEU54E, LYS41B, LYS41E, LYS53E, LYS55B, LYS55E, LYS56B, PHE25B, PHE25E, PHE32B, PHE32E, PRO20B, PRO22B, PRO22E, PRO26B, PRO26E, SER24B, SER24E, SER48E, THR23B, THR23E, TYR39B, TYR43B, TYR43E, TYR45E, TYR58B, VAL34B, VAL34E, VAL52E
• B-F: ALA59F, ARG49B, ASN30B, ASN30F, ASN46B, ASN50B, ASP37F, ASP60F, ASP61F, GLN21B, GLN21F, GLU28B, GLU28F, GLU36B, GLU36F, GLU44B, GLU44F, GLU47B, GLU51B, GLU57B, GLU57F, GLY33B, GLY33F, GLY38F, HIS29B, HIS29F, HIS31B, HIS31F, ILE40F, ILE42F, LEU27B, LEU27F, LEU54B, LEU54F, LYS41B, LYS41F, LYS53B, LYS55B, LYS55F, LYS56F, PHE25B, PHE25F, PHE32B, PHE32F, PRO20B, PRO20F, PRO22B, PRO22F, PRO26B, PRO26F, SER24B, SER24F, SER48B, THR23B, THR23F, TYR43B, TYR43F, TYR45B, TYR58F, VAL34B, VAL34F, VAL52B
• C-D: ALA59C, ARG49D, ASN30C, ASN30D, ASN46D, ASN50D, ASP37C, ASP60C, ASP61C, GLN21C, GLN21D, GLU28C, GLU28D, GLU36C, GLU36D, GLU44C, GLU44D, GLU47D, GLU51D, GLU57C, GLU57D, GLU62C, GLU64C, GLY33C, GLY33D, GLY38C, HIS29C, HIS29D, HIS31C, HIS31D, ILE40C, ILE42C, LEU27C, LEU27D, LEU54C, LEU54D, LEU63C, LEU65C, LYS41C, LYS41D, LYS53D, LYS55C, LYS55D, LYS56C, PHE25C, PHE25D, PHE32C, PHE32D, PRO22C, PRO22D, PRO26C, PRO26D, SER24C, SER24D, SER48D, THR23C, THR23D, TYR39C, TYR39D, TYR43C, TYR43D, TYR45D, TYR58C, VAL34C, VAL34D, VAL52D
• C-E: ALA59E, ARG49C, ASN30C, ASN30E, ASN46C, ASN50C, ASP37E, ASP60E, ASP61E, GLN21C, GLN21E, GLU28C, GLU28E, GLU36C, GLU36E, GLU44C, GLU44E, GLU47C, GLU51C, GLU57C, GLU57E, GLU62E, GLY33C, GLY33E, GLY38E, HIS29C, HIS29E, HIS31C, HIS31E, ILE40E, ILE42E, LEU27C, LEU27E, LEU54C, LEU54E, LEU63E, LYS41C, LYS41E, LYS53C, LYS55C, LYS55E, LYS56C, LYS56E, PHE25C, PHE25E, PHE32C, PHE32E, PRO22C, PRO22E, PRO26C, PRO26E, SER24C, SER24E, SER48C, THR23C, THR23E, TYR43C, TYR43E, TYR45C, TYR58E, VAL34C, VAL34E, VAL52C
• C-F: GLN21C, GLN21F, PRO26C, PRO26F
• D-E: GLN21D, GLN21E, PHE25E, PRO22D, PRO26D, PRO26E, SER24D, SER24E, THR23D, THR23E
• D-F: ASN50F, GLN21D, GLN21F, HIS67D, PHE25D, PRO22F, PRO26D, PRO26F, SER24F, THR23D, THR23F
• E-F: GLN21E, GLN21F, PHE25F, PRO22E, PRO26E, PRO26F, SER24E, SER24F, THR23E, THR23F