3KTS

crystal structure of glycerol uptake operon antiterminator regulatory protein from listeria monocytogenes str. 4b f2365

• Total interactions analyzed: 28
• Total true interactions: 13
• Strongest Interaction:
  • Chains: D-E
  • Int. Res.: 60
  • Norm. En. per Res.: -3.6894
• Hub Node: B(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	-1.9223	-175.445	-177.3673	81	0	9	8190	2	12	17
A-E	-3.8865	-0.4207	-86.4974	-90.8046	45	4	1	3382	0	13	7
A-G	0.0	6.5548	-7.9855	-1.4307	10	0	0	261	0	8	8
B-E	0.0	0.0	-0.0015	-0.0015	2	0	0	1	0	1	0
B-F	0.0	0.0	-0.1951	-0.1951	4	0	0	50	0	1	0
B-G	0.0	-5.5904	-2.0863	-7.6768	10	0	0	185	0	3	1
B-H	-3.0721	-13.7135	-40.0002	-56.7859	33	1	1	1810	1	10	4
C-D	0.0	7.3657	-176.661	-169.2953	81	5	9	8263	1	13	17
C-F	-21.4603	-6.2629	-204.637	-232.3602	63	4	11	7498	0	18	17
C-H	-3.525	-1.6596	-48.1443	-53.3289	33	2	0	2187	0	3	13
D-E	-20.9275	-7.3865	-193.05	-221.3641	60	5	11	7161	0	18	18
E-F	0.0	0.0	-165.827	-165.827	79	4	9	8058	3	13	17
G-H	0.0	7.1726	-175.302	-168.1294	80	4	8	8199	4	13	17

Interface residues

• A-B: ALA113A, ALA113B, ALA13A, ARG105A, ARG105B, ASN115A, ASN115B, ASN178A, ASN178B, ASN63A, ASP110A, ASP110B, GLN139A, GLN139B, GLN162A, GLN162B, GLU130A, GLU138A, GLU138B, GLU158A, GLU158B, GLU35A, GLU35B, GLY134A, GLY134B, GLY154A, GLY154B, GLY155A, GLY155B, HIS15A, HIS15B, HIS58A, HIS58B, ILE109A, ILE109B, ILE135A, ILE135B, ILE136A, ILE136B, ILE157A, ILE157B, LEU106A, LEU106B, LEU131A, LEU131B, LEU132A, LEU132B, LEU156A, LEU156B, LEU34A, LEU34B, LEU61A, LEU61B, LYS116A, LYS116B, LYS142A, LYS142B, LYS179A, MET108A, MET108B, PHE107A, PHE107B, PRO133A, PRO133B, PRO137A, PRO137B, SER111A, SER111B, SER112A, SER112B, SER177A, SER177B, THR159A, THR159B, THR175A, THR175B, THR176A, THR176B, TYR114A, TYR114B, VAL140A
• A-E: ALA119E, ALA168A, ASN164A, ASN7A, ASN90E, GLN122E, GLN125E, GLN141A, GLN145A, GLN162A, GLN165A, GLN97E, GLU161A, GLU183A, GLY170A, GLY184A, GLY89E, HIS148E, HIS180A, HIS185A, HIS98E, ILE121E, ILE149E, ILE167A, ILE92E, LEU120E, LEU147E, LEU181A, LEU1E, LYS123E, LYS146E, LYS94E, LYS96E, LYS99E, MET93E, PRO126E, PRO137A, SER160A, SER169A, SER9A, THR159A, VAL118E, VAL124E, VAL163A, VAL166A
• A-G: ASN164G, ASN16A, GLU183G, GLY184G, HIS185G, ILE10G, LYS18A, LYS22A, SER160G, SER9G
• B-E: GLU138B, LYS123E
• B-F: ASN164B, GLU161B, LYS18F, SER160B
• B-G: ALA119B, ASN115B, GLN141G, GLN165G, GLU138G, GLU161G, LYS116B, LYS123B, PRO137G, SER169G
• B-H: ALA168H, ASN164H, ASP127B, GLN122B, GLN125B, GLN141H, GLN145B, GLN145H, GLN162H, GLN165H, GLU138H, GLU161H, GLY184H, HIS148B, ILE121B, ILE135H, ILE136H, ILE149B, ILE92B, LEU147B, LYS123B, LYS146B, LYS96B, LYS99B, MET93B, PRO126B, PRO137H, SER160H, SER169H, THR159H, VAL124B, VAL163H, VAL166H
• C-D: ALA113C, ALA113D, ALA13D, ARG105C, ARG105D, ASN115C, ASN115D, ASN178C, ASN178D, ASN63D, ASP110C, ASP110D, GLN139C, GLN139D, GLN162C, GLN162D, GLU130C, GLU130D, GLU138C, GLU138D, GLU158C, GLU158D, GLU35C, GLU35D, GLY134C, GLY134D, GLY154C, GLY154D, GLY155C, GLY155D, HIS15C, HIS15D, HIS58C, HIS58D, ILE109C, ILE109D, ILE135C, ILE135D, ILE136C, ILE136D, ILE157C, ILE157D, LEU106C, LEU106D, LEU131C, LEU131D, LEU132C, LEU132D, LEU156C, LEU156D, LEU34C, LEU34D, LEU61C, LEU61D, LYS116C, LYS116D, LYS142C, LYS142D, MET108C, MET108D, PHE107C, PHE107D, PRO133C, PRO133D, PRO137C, PRO137D, SER111C, SER111D, SER112C, SER112D, SER177C, SER177D, THR159C, THR159D, THR175C, THR175D, THR176C, THR176D, THR87D, TYR114C, TYR114D
• C-F: ALA39C, ALA39F, ALA43C, ALA43F, ALA71C, ALA71F, ASN63C, ASN63F, ASN67C, ASN67F, ASP60C, ASP60F, ASP68C, ASP68F, ASP69C, ASP69F, ASP73C, ASP73F, CYS76C, CYS76F, GLN40C, GLN40F, GLU35C, GLU35F, GLU78C, GLU78F, GLY64C, GLY64F, HIS37C, HIS37F, HIS98C, HIS98F, ILE72C, ILE72F, ILE79C, ILE79F, LEU41C, LEU41F, LEU44C, LEU44F, LEU61C, LEU61F, LEU65C, LEU65F, LEU75C, LEU75F, LYS42C, LYS42F, LYS46C, LYS66C, LYS66F, PHE74C, PHE74F, THR36C, THR36F, THR77C, THR77F, TYR70C, TYR70F, VAL38C, VAL38F, VAL62C, VAL62F
• C-H: ALA119C, GLN122C, GLN122H, GLN125C, GLN125H, GLN145C, GLN145H, GLU2C, GLU2H, HIS148C, HIS148H, ILE121C, ILE121H, ILE149C, ILE149H, LEU147C, LEU147H, LEU1H, LYS123C, LYS123H, LYS142C, LYS142H, LYS146C, LYS146H, LYS96H, MET143C, MET143H, PRO150H, THR144C, THR144H, TYR114C, VAL118C, VAL124H
• D-E: ALA39D, ALA39E, ALA43D, ALA43E, ALA71D, ALA71E, ASN63D, ASN63E, ASN67D, ASN67E, ASP60D, ASP60E, ASP68D, ASP68E, ASP69D, ASP69E, ASP73D, ASP73E, CYS76D, CYS76E, GLN40D, GLN40E, GLU35D, GLU35E, GLU78D, GLU78E, GLY64D, GLY64E, HIS37D, HIS37E, HIS98D, HIS98E, ILE72D, ILE72E, ILE79D, ILE79E, LEU41D, LEU41E, LEU61D, LEU61E, LEU65D, LEU65E, LEU75D, LEU75E, LYS42D, LYS42E, LYS66D, LYS66E, PHE74D, PHE74E, THR36D, THR36E, THR77D, THR77E, TYR70D, TYR70E, VAL38D, VAL38E, VAL62D, VAL62E
• E-F: ALA113E, ALA113F, ALA13F, ARG105E, ARG105F, ASN115E, ASN115F, ASN178E, ASN178F, ASP110E, ASP110F, GLN139E, GLN139F, GLN162E, GLN162F, GLU130F, GLU138E, GLU138F, GLU158E, GLU158F, GLU35E, GLU35F, GLY134E, GLY134F, GLY154E, GLY154F, GLY155E, GLY155F, HIS15E, HIS15F, HIS58E, HIS58F, ILE109E, ILE109F, ILE135E, ILE135F, ILE136E, ILE136F, ILE157E, ILE157F, LEU106E, LEU106F, LEU131E, LEU131F, LEU132E, LEU132F, LEU156E, LEU156F, LEU34E, LEU34F, LEU61E, LEU61F, LYS116E, LYS116F, LYS142E, LYS142F, LYS179F, MET108E, MET108F, PHE107E, PHE107F, PRO133E, PRO133F, PRO137E, PRO137F, SER111E, SER111F, SER112E, SER112F, SER177E, SER177F, THR159E, THR159F, THR175E, THR175F, THR176E, THR176F, TYR114E, TYR114F
• G-H: ALA113G, ALA113H, ALA13G, ALA13H, ARG105G, ARG105H, ASN115G, ASN115H, ASN178G, ASN178H, ASN63G, ASN63H, ASP110G, ASP110H, GLN139G, GLN139H, GLN162G, GLN162H, GLU138G, GLU138H, GLU158G, GLU158H, GLU35G, GLU35H, GLY134G, GLY134H, GLY154G, GLY154H, GLY155G, GLY155H, HIS15G, HIS15H, HIS58G, HIS58H, ILE109G, ILE109H, ILE135G, ILE135H, ILE136G, ILE136H, ILE157G, ILE157H, LEU106G, LEU106H, LEU131G, LEU131H, LEU132G, LEU132H, LEU156G, LEU156H, LEU34G, LEU34H, LEU61G, LEU61H, LYS116G, LYS116H, LYS142G, LYS142H, LYS179H, MET108G, MET108H, PHE107G, PHE107H, PRO133G, PRO133H, PRO137G, PRO137H, SER111G, SER111H, SER112G, SER112H, SER177G, SER177H, THR159H, THR175G, THR175H, THR176G, THR176H, TYR114G, TYR114H