3KNT

crystal structure of methanocaldococcus jannaschii 8- oxoguanine glycosylase/lyase in complex with 15mer dna containing 8-oxoguanine

• Total interactions analyzed: 66
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 19
  • Norm. En. per Res.: -3.38
• Hub Node: B(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	-44.3812	-19.839	-64.2202	19	7	0	1121	3	17	9
B-C	0.0	0.0	-4.1394	-4.1394	11	0	0	157	0	5	6
B-D	-23.2033	-23.4517	-105.014	-151.669	49	8	0	4933	2	20	16

Interface residues

• A-B: ARG152A, ARG169B, ARG170B, ASN157A, ASN158A, ASN177B, ASP161A, GLU117B, GLU156A, GLU162A, GLU174B, ILE160A, ILE163A, LEU173B, LYS165A, LYS171B, SER168B, TYR155A, TYR159A
• B-C: ASN157B, ASN157C, ASN158B, ASN158C, ASP161B, GLU156B, GLU156C, GLU162B, ILE163B, TYR155B, TYR155C
• B-D: ALA115B, ALA96B, ALA96D, ARG121B, ARG121D, ARG97B, ARG97D, ARG98B, ARG98D, ASN101B, ASN101D, ASN122B, ASN122D, ASN34B, ASN34D, ASP104B, ASP104D, GLU107B, GLU107D, GLU110B, GLU110D, GLU117B, GLU117D, ILE102B, ILE102D, ILE105B, ILE105D, ILE123B, LEU95B, LEU95D, LYS100B, LYS100D, LYS103B, LYS103D, LYS124D, PHE109B, PHE109D, PHE118B, PHE118D, PHE99B, PHE99D, SER108B, SER108D, VAL106B, VAL106D, VAL114B, VAL114D, VAL94B, VAL94D