3KNJ
the structures of viomycin bound to the 70s ribosome. this file contains the 30s subunit for molecule ii'
Total interactions analyzed 325
Total true interactions 26
Strongest Interaction Chains J-N
Int. Res. 53
Norm. En. per Res. -3.6915
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0316 -0.0316 4 0 0 14 0 1 2
B-E 0.0 0.0 -0.4228 -0.4228 10 0 0 129 0 0 2
B-H 0.0 -31.5718 -42.54 -74.1118 34 13 0 2464 0 17 16
C-D 0.0 3.2088 -2.9012 0.3075 9 0 0 246 0 0 8
C-E 0.0 -21.8401 -11.3392 -33.1793 15 5 0 846 0 5 6
C-J -9.862 -1.2084 -68.1066 -79.177 51 2 2 3148 0 15 26
C-N -12.6303 11.3018 -196.573 -197.9015 80 6 3 8897 0 19 38
D-E 0.0 -23.0848 -34.2933 -57.3781 46 5 0 2003 1 7 9
E-H -21.0814 -39.4223 -115.379 -175.8827 63 9 2 5986 3 41 45
F-O 0.0 0.0 -0.5361 -0.5361 4 0 0 93 0 1 2
F-R -41.7341 -37.2133 -196.186 -275.1334 84 36 11 9920 1 13 21
G-I 0.0 3.9883 -37.3345 -33.3462 41 4 4 2275 0 5 8
G-K 0.0 0.0 -45.1512 -45.1512 30 6 4 2331 0 2 6
G-U 0.0 0.0 -0.0132 -0.0132 4 0 0 10 0 2 0
H-L 0.0 0.0 -10.8568 -10.8568 10 0 0 473 0 0 1
H-Q 0.0 3.5673 -28.0322 -24.4649 16 2 0 1200 0 2 8
I-J 0.0 -0.8304 -27.9791 -28.8095 18 1 0 1168 0 9 15
I-N 0.0 0.0 -11.2708 -11.2708 9 0 0 521 0 0 0
J-N -13.342 -15.8922 -166.417 -195.6512 53 21 6 8111 2 15 36
K-R -7.7867 -15.2659 -47.9915 -71.0441 30 9 2 2523 0 15 17
L-Q 0.0 0.0 -30.5157 -30.5157 20 9 4 2258 0 0 8
L-Z 0.0 0.0 -0.0096 -0.0096 3 0 0 6 0 0 0
M-S -6.4804 18.2185 -67.6858 -55.9477 48 17 3 4084 0 11 24
M-U 0.0 0.0 -1.5115 -1.5115 10 0 0 263 0 3 9
N-S 0.0 0.0 -0.1288 -0.1288 3 0 0 36 0 1 1
O-Q 0.0 -2.7886 -0.6625 -3.4511 12 0 0 127 0 7 6