3KNH
the structures of viomycin bound to the 70s ribosome. this file contains the 30s subunit for molecule i
Total interactions analyzed 325
Total true interactions 26
Strongest Interaction Chains J-N
Int. Res. 54
Norm. En. per Res. -3.8637
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0335 -0.0335 6 0 0 24 0 3 2
B-E 0.0 0.0 -0.3521 -0.3521 5 0 0 58 0 0 2
B-H -3.3495 -28.6927 -57.4914 -89.5336 33 11 0 2738 0 15 15
C-D 0.0 6.111 -5.9805 0.1305 11 1 0 317 0 0 7
C-E 0.0 -21.9553 -16.5817 -38.537 17 2 0 873 0 4 6
C-J 0.0 8.3925 -60.9527 -52.5602 55 2 1 3174 0 16 26
C-N -15.5235 15.4403 -226.924 -227.0072 80 17 3 9225 0 18 39
D-E -2.0924 -29.5959 -30.3295 -62.0178 42 1 0 1804 1 5 8
E-H -13.2768 -8.2284 -109.305 -130.8102 61 19 2 6136 2 39 44
F-O 0.0 0.0 -1.6984 -1.6984 4 0 0 162 0 2 2
F-R -56.2551 -32.2632 -246.166 -334.6842 87 35 9 10096 1 12 22
G-I 0.0 2.8569 -38.595 -35.7381 37 5 4 2180 0 6 8
G-K 0.0 0.0 -48.3514 -48.3514 25 5 4 2335 0 2 6
G-U 0.0 0.0 -0.0342 -0.0342 2 0 0 19 0 2 0
H-L 0.0 0.0 -13.1203 -13.1203 10 1 0 577 0 0 2
H-Q 0.0 5.1894 -27.8825 -22.6931 16 3 0 1236 0 2 8
I-J 0.0 -2.6877 -23.3275 -26.0152 18 6 0 1199 0 9 15
I-N 0.0 0.0 -14.1692 -14.1692 9 1 0 478 0 0 0
J-N -46.8091 -11.7335 -150.096 -208.6386 54 47 6 8164 3 17 35
K-R 0.0 -16.1105 -50.7311 -66.8416 30 3 2 2488 0 12 18
L-Q 0.0 0.0 -36.8758 -36.8758 22 5 4 1955 0 0 8
L-Z 0.0 0.0 -0.0058 -0.0058 2 0 0 3 0 0 0
M-S -16.1935 29.5223 -91.3149 -77.986 44 18 3 4612 0 10 23
M-U 0.0 0.0 -1.7104 -1.7104 11 0 0 280 0 3 10
N-S 0.0 0.0 -0.1342 -0.1342 3 0 0 35 0 0 0
O-Q 0.0 -1.4843 -0.13 -1.6143 14 0 0 60 0 7 7