3KMD

crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramer

• Total interactions analyzed: 15
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 39
  • Norm. En. per Res.: -4.1899
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-9.3283	-64.2638	-89.8156	-163.4076	39	8	0	3293	6	6	21
A-D	-41.4911	-4.6922	-104.865	-151.0483	55	15	1	3896	0	10	6
B-D	0.0	0.0	-0.0014	-0.0014	2	0	0	1	0	0	1
B-C	-14.55	-10.242	-69.01	-93.802	51	14	1	3253	0	10	6
D-C	-3.7584	0.0	-88.3618	-92.1202	38	5	0	3137	4	6	21

Interface residues

• A-B: ARG174A, ARG174B, ARG175A, ARG175B, ARG181A, ARG181B, ASN239A, ASN239B, ASN247A, ASN247B, CYS176A, CYS176B, CYS182A, CYS182B, CYS238A, CYS238B, CYS242A, CYS242B, GLN192A, GLN192B, GLU180A, GLU180B, GLY244A, GLY244B, GLY245A, GLY245B, HIS178A, HIS178B, HIS179A, HIS179B, LEU137A, LEU137B, MET243A, MET243B, PRO177A, PRO177B, PRO191B, SER241A, SER241B
• A-D: ARG202D, ARG267A, ASN200D, ASN210A, ASN235D, ASP186D, CYS141D, GLN100A, GLN144D, GLN165A, GLN167A, GLU171A, GLU198D, GLU221D, GLU224D, GLY199D, GLY226D, HIS168A, HIS233D, ILE162A, ILE232D, ILE254A, LEU114D, LEU188D, LEU201D, LEU93A, LYS101A, LYS139D, MET169A, PHE212A, PRO142D, PRO219D, PRO223D, PRO92A, PRO98A, SER166A, SER227D, SER94A, SER95A, SER96A, SER99A, THR102A, THR123D, THR140D, THR170A, THR211A, THR230D, THR231D, TYR234D, VAL143D, VAL172A, VAL197D, VAL203D, VAL225D, VAL97A
• B-D: SER183B, SER183D
• B-C: ARG202B, ARG267C, ASN200B, ASN210C, ASN235B, ASP186B, CYS141B, GLN100C, GLN144B, GLN165C, GLN167C, GLU171C, GLU198B, GLU221B, GLU224B, GLY199B, GLY226B, HIS168C, HIS233B, ILE232B, LEU114B, LEU188B, LEU201B, LEU93C, LYS101C, LYS139B, MET169C, PHE212C, PRO142B, PRO223B, PRO92C, PRO98C, SER166C, SER227B, SER94C, SER95C, SER96C, SER99C, THR102C, THR123B, THR140B, THR170C, THR211C, THR231B, TYR234B, VAL143B, VAL172C, VAL197B, VAL203B, VAL225B, VAL97C
• D-C: ARG174C, ARG174D, ARG175C, ARG175D, ARG181C, ARG181D, ASN239C, ASN239D, ASN247C, ASN247D, CYS176C, CYS176D, CYS182C, CYS182D, CYS238C, CYS238D, CYS242C, CYS242D, GLN192C, GLN192D, GLU180C, GLU180D, GLY244C, GLY244D, GLY245C, GLY245D, HIS178C, HIS178D, HIS179C, HIS179D, LEU137C, LEU137D, MET243C, MET243D, PRO177C, PRO177D, SER241C, SER241D