3KK5
crystal structure of pbcv-1 vp54 fitted into a cryo-em reconstruction of the virophage sputnik
Total interactions analyzed 78
Total true interactions 25
Strongest Interaction Chains A-D
Int. Res. 12
Norm. En. per Res. -0.1249
Hub Node A(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B 0.0 0.0 -0.0024 -0.0024 4 0 0 6 0 0 0
A-D 0.0 0.0 -1.4983 -1.4983 12 0 0 184 0 0 0
A-I 0.0 0.0 -2.2606 -2.2606 19 0 0 172 0 0 0
A-J 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 0 0
B-C 0.0 0.0 -9.5786 -9.5786 86 0 0 1177 0 0 0
B-D 0.0 0.0 -9.6736 -9.6736 89 0 0 1182 0 0 0
B-G 0.0 0.0 -0.0489 -0.0489 7 0 0 25 0 0 0
B-I 0.0 0.0 0.4451 0.4451 41 7 0 578 0 0 0
C-D 0.0 0.0 -9.7177 -9.7177 84 0 0 1167 0 0 0
C-G 0.0 0.0 -0.1477 -0.1477 9 0 0 53 0 0 0
E-F 0.0 0.0 -9.6727 -9.6727 86 0 0 1171 0 0 0
E-G 0.0 0.0 -9.602 -9.602 87 0 0 1194 0 0 0
E-H 0.0 0.0 -0.2194 -0.2194 9 0 0 74 0 0 0
E-L 0.0 0.0 -2.2908 -2.2908 21 0 0 171 0 0 0
F-G 0.0 0.0 -9.7269 -9.7269 88 0 0 1176 0 0 0
G-H 0.0 0.0 -0.6598 -0.6598 12 0 0 172 0 0 0
G-I 0.0 0.0 -0.0295 -0.0295 7 0 0 28 0 0 0
H-I 0.0 0.0 -9.5352 -9.5352 90 0 0 1223 0 0 0
H-J 0.0 0.0 -9.7603 -9.7603 90 0 0 1185 0 0 0
H-L 0.0 0.0 -0.0007 -0.0007 3 0 0 2 0 0 0
H-M 0.0 0.0 -0.1341 -0.1341 8 0 0 34 0 0 0
I-J 0.0 0.0 -9.6654 -9.6654 81 0 0 1166 0 0 0
K-L 0.0 0.0 -9.5914 -9.5914 91 0 0 1217 0 0 0
K-M 0.0 0.0 -9.769 -9.769 90 0 0 1180 0 0 0
L-M 0.0 0.0 -9.5888 -9.5888 79 0 0 1168 0 0 0