3KIS
structure of rele nuclease bound to the 70s ribosome (precleavage state; part 3 of 4)
Total interactions analyzed 300
Total true interactions 28
Strongest Interaction Chains j-n
Int. Res. 57
Norm. En. per Res. -4.4411
Hub Node C(5)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
b-c 0.0 0.0 -0.0111 -0.0111 6 0 0 15 0 3 4
b-e 0.0 0.0 -0.1206 -0.1206 8 0 0 61 0 0 2
b-h -7.4587 -35.3111 -57.4635 -100.2333 32 7 0 2672 2 16 18
c-d 0.0 0.0 -0.2142 -0.2142 5 0 0 57 0 0 4
c-e -2.0975 -26.9806 -9.409 -38.4871 13 3 0 592 1 4 5
c-j 0.0 8.3063 -79.8379 -71.5316 59 2 2 3730 0 15 29
c-n -10.753 7.9134 -217.37 -220.2097 78 10 3 9062 0 20 37
c-y 0.0 0.0 -0.0279 -0.0279 2 0 0 7 0 1 0
d-e -8.9186 -30.3959 -62.4688 -101.7833 51 4 0 2940 2 8 11
e-h -8.0752 -36.3049 -131.786 -176.1661 64 17 2 6165 3 41 43
f-o 0.0 0.0 -2.5223 -2.5223 5 0 0 184 0 2 3
f-r -47.9757 -32.2866 -253.363 -333.6253 88 33 10 10525 0 13 21
g-i 0.0 2.5634 -28.2629 -25.6995 37 5 3 1974 0 6 9
g-k -2.9996 0.0 -65.8579 -68.8575 27 7 4 2454 0 3 6
g-u 0.0 0.0 -0.0676 -0.0676 2 0 0 22 0 2 0
h-l 0.0 0.0 -8.9388 -8.9388 9 0 0 448 0 0 1
h-q 0.0 4.461 -27.9983 -23.5373 15 1 0 1247 0 2 7
i-j 0.0 -1.9383 -20.0975 -22.0358 18 9 0 1256 0 9 15
i-n 0.0 0.0 -15.3644 -15.3644 8 0 0 525 0 0 0
j-n -8.4721 -37.1458 -207.526 -253.144 57 22 5 8647 4 16 34
k-r -3.5406 -16.1649 -70.6997 -90.4052 31 7 2 3163 1 13 18
l-q 0.0 0.0 -48.0266 -48.0266 21 1 4 2257 0 0 8
l-y 0.0 0.0 -7.6748 -7.6748 20 0 0 642 0 3 2
m-s -4.8814 25.6861 -88.7186 -67.914 45 9 3 4179 0 9 22
m-u 0.0 0.0 -2.4525 -2.4525 12 0 0 350 0 3 10
m-y 0.0 0.0 -0.0043 -0.0043 2 0 0 2 0 0 0
n-s 0.0 0.0 -0.1318 -0.1318 3 0 0 38 0 1 1
o-q 0.0 -1.1758 -0.3904 -1.5663 9 0 0 119 0 7 6