3KIQ
structure of rele nuclease bound to the 70s ribosome (precleavage state; part 1 of 4)
Total interactions analyzed 300
Total true interactions 27
Strongest Interaction Chains j-n
Int. Res. 57
Norm. En. per Res. -4.479
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
b-c 0.0 0.0 -0.0111 -0.0111 6 0 0 15 0 3 4
b-e 0.0 0.0 -0.1275 -0.1275 8 0 0 63 0 0 2
b-h -4.7539 -35.4681 -54.9314 -95.1535 33 11 0 2810 2 17 18
c-d 0.0 0.0 -0.2239 -0.2239 5 0 0 58 0 0 4
c-e 0.0 -28.2873 -4.8434 -33.1307 16 4 0 651 1 4 5
c-j 0.0 8.2706 -80.0474 -71.7768 59 2 2 3722 0 15 29
c-n -10.5061 7.9181 -205.397 -207.985 78 12 3 9060 0 20 37
d-e -8.7797 -30.4301 -62.4437 -101.6534 51 4 0 2942 2 8 11
e-h -8.837 -30.3135 -134.325 -173.4756 62 11 2 6111 3 40 42
f-o 0.0 0.0 -2.7859 -2.7859 5 1 0 191 0 2 3
f-r -44.7936 -32.1554 -254.201 -331.15 87 31 10 10544 0 13 21
g-i 0.0 2.5548 -27.955 -25.4002 37 5 3 1977 0 6 9
g-k 0.0 0.0 -48.0319 -48.0319 27 9 4 2389 0 2 6
g-u 0.0 0.0 -0.0676 -0.0676 2 0 0 22 0 2 0
h-l 0.0 0.0 -7.6337 -7.6337 9 0 0 416 0 0 1
h-q 0.0 4.3997 -27.8154 -23.4157 15 1 0 1230 0 2 8
i-j 0.0 -1.9258 -20.2471 -22.1729 18 9 0 1276 0 9 15
i-n 0.0 0.0 -15.3381 -15.3381 8 0 0 524 0 0 0
j-n -14.2787 -36.7061 -204.32 -255.3048 57 25 5 8656 4 16 34
k-r -3.5737 -16.1978 -70.8813 -90.6528 31 7 2 3176 1 13 17
l-q 0.0 0.0 -48.4654 -48.4654 23 2 4 2279 0 0 8
l-y 0.0 0.0 -7.221 -7.221 20 2 0 622 0 3 2
m-s -4.9544 25.9176 -87.7788 -66.8155 44 8 3 4159 0 9 23
m-u 0.0 0.0 -2.5403 -2.5403 12 0 0 362 0 3 11
m-y 0.0 0.0 -0.0133 -0.0133 3 0 0 6 0 0 0
n-s 0.0 0.0 -0.1321 -0.1321 3 0 0 38 0 1 1
o-q 0.0 -1.2171 -0.5416 -1.7587 10 0 0 141 0 7 6