3KDQ

crystal structure of a functionally unknown conserved protein from corynebacterium diphtheriae.

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 164
  • Norm. En. per Res.: -4.0453
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-0.2068	-0.2068	10	0	0	90	0	0	2
A-C	-99.5893	-153.9131	-475.982	-729.4843	190	28	12	21650	8	62	46
A-D	-5.1638	-7.7644	-83.4378	-96.366	32	2	1	2723	0	10	12
B-C	0.0	5.5372	-81.292	-75.7548	33	12	1	2755	0	11	15
B-D	-122.4971	-147.8645	-481.556	-751.9176	187	32	12	21552	7	61	49
C-D	-73.8168	-260.3971	-329.22	-663.434	164	23	7	13681	25	86	86

Interface residues

• A-B: GLN31A, GLN31B, GLU32A, GLU32B, ILE112A, ILE112B, LYS29A, LYS29B, TYR114A, TYR114B
• A-C: ALA116A, ALA116C, ALA120A, ALA120C, ALA13A, ALA13C, ALA28A, ALA28C, ALA37A, ALA77A, ALA77C, ALA79A, ALA79C, ALA85A, ALA85C, ALA97A, ALA97C, ARG103A, ARG103C, ARG106A, ARG109A, ARG109C, ARG10A, ARG10C, ARG15A, ARG15C, ARG59A, ARG59C, ARG60A, ARG60C, ARG63A, ARG63C, ARG83C, ARG90A, ARG90C, ASN21A, ASN21C, ASN39A, ASN39C, ASN55A, ASN55C, ASN62A, ASN62C, ASN65A, ASN65C, ASP105C, ASP119A, ASP119C, ASP26A, ASP26C, ASP34A, ASP34C, ASP78A, ASP78C, ASP84A, ASP84C, ASP95A, ASP95C, ASP98A, ASP98C, GLN104A, GLN104C, GLN14A, GLN14C, GLN22A, GLN22C, GLN31A, GLN31C, GLN35A, GLN35C, GLN99A, GLN99C, GLU111A, GLU111C, GLU122A, GLU122C, GLU32A, GLU32C, GLU38A, GLU38C, GLU48A, GLU48C, GLU72A, GLU72C, GLY33A, GLY33C, GLY73A, GLY73C, HIS41A, HIS41C, ILE112A, ILE112C, ILE123A, ILE123C, ILE43A, ILE43C, ILE54A, ILE54C, LEU100A, LEU100C, LEU137A, LEU137C, LEU20A, LEU20C, LEU23C, LEU24A, LEU24C, LEU25A, LEU25C, LEU44A, LEU44C, LEU47A, LEU47C, LEU50A, LEU50C, LEU76A, LEU76C, LEU80A, LEU80C, LEU86A, LEU86C, LEU87A, LEU87C, LEU92A, LEU92C, LEU96A, LEU96C, LYS113A, LYS113C, LYS126A, LYS126C, LYS29A, LYS29C, LYS88A, LYS88C, LYS89A, LYS89C, PHE70A, PHE70C, PRO36A, PRO36C, PRO40A, PRO40C, SER102A, SER102C, SER108C, SER110C, SER18A, SER18C, SER66A, SER66C, SER71A, SER71C, SER81A, SER81C, SER94A, SER94C, THR101A, THR101C, THR117A, THR117C, THR45A, THR45C, THR51A, THR51C, THR52A, THR52C, THR75A, THR75C, THR91A, THR91C, TYR107C, TYR114A, TYR114C, TYR17A, TYR17C, TYR93A, TYR93C, VAL115A, VAL115C, VAL27A, VAL27C, VAL30A, VAL30C, VAL58A, VAL58C, VAL67A, VAL67C, VAL82A, VAL82C
• A-D: ALA37D, ARG106A, ARG106D, ARG109A, ARG109D, ASP105A, ASP105D, GLN104A, GLN104D, GLN31A, GLN31D, GLN99A, GLU111A, GLU111D, GLU32A, GLY33D, ILE112A, ILE112D, LYS113A, LYS113D, LYS29A, SER102D, SER108A, SER108D, SER110A, SER110D, THR101D, TYR107A, TYR107D, TYR114A, TYR114D, VAL30A
• B-C: ALA37C, ARG103C, ARG106B, ARG106C, ARG109B, ARG109C, ASP105C, GLN104B, GLN104C, GLN31B, GLN31C, GLN99B, GLU111B, GLU111C, GLU32B, GLY33C, ILE112B, ILE112C, LYS113B, LYS113C, LYS29B, SER102C, SER108B, SER108C, SER110B, SER110C, THR101C, TYR107B, TYR107C, TYR114B, TYR114C, VAL115B, VAL30B
• B-D: ALA116B, ALA116D, ALA120B, ALA120D, ALA13B, ALA13D, ALA28B, ALA28D, ALA37B, ALA77B, ALA77D, ALA79B, ALA79D, ALA85B, ALA85D, ALA97B, ALA97D, ARG103B, ARG103D, ARG106B, ARG106D, ARG109B, ARG109D, ARG10B, ARG10D, ARG15B, ARG15D, ARG59B, ARG59D, ARG60B, ARG60D, ARG63B, ARG63D, ARG83B, ARG83D, ARG90B, ARG90D, ASN21B, ASN21D, ASN39B, ASN39D, ASN55B, ASN55D, ASN62B, ASN62D, ASN65B, ASN65D, ASP105D, ASP119B, ASP119D, ASP26B, ASP26D, ASP34B, ASP34D, ASP78B, ASP78D, ASP84B, ASP84D, ASP95B, ASP95D, ASP98B, ASP98D, GLN104B, GLN104D, GLN14B, GLN14D, GLN22B, GLN22D, GLN31B, GLN31D, GLN35B, GLN35D, GLN99B, GLN99D, GLU111B, GLU111D, GLU122B, GLU122D, GLU32B, GLU32D, GLU38B, GLU38D, GLU48B, GLU48D, GLU72B, GLU72D, GLY33B, GLY33D, GLY73B, GLY73D, HIS41B, HIS41D, ILE112B, ILE112D, ILE123B, ILE123D, ILE43B, ILE43D, ILE54B, ILE54D, LEU100B, LEU100D, LEU20B, LEU20D, LEU23B, LEU23D, LEU24B, LEU24D, LEU25B, LEU25D, LEU44B, LEU44D, LEU47B, LEU47D, LEU50B, LEU50D, LEU76B, LEU76D, LEU80B, LEU80D, LEU86B, LEU86D, LEU87B, LEU87D, LEU92B, LEU92D, LEU96B, LEU96D, LYS113B, LYS113D, LYS126B, LYS126D, LYS29B, LYS29D, LYS88B, LYS88D, LYS89B, LYS89D, PRO36B, PRO36D, PRO40B, PRO40D, SER102B, SER102D, SER110D, SER18B, SER18D, SER66B, SER66D, SER71D, SER81B, SER81D, SER94B, SER94D, THR101B, THR101D, THR117B, THR117D, THR45B, THR45D, THR51B, THR51D, THR52B, THR52D, THR75B, THR75D, THR91B, THR91D, TYR107D, TYR114B, TYR114D, TYR17B, TYR17D, TYR93B, TYR93D, VAL115B, VAL115D, VAL27B, VAL27D, VAL30B, VAL30D, VAL58B, VAL58D, VAL67B, VAL67D, VAL82B, VAL82D
• C-D: ALA116C, ALA116D, ALA120C, ALA120D, ALA127C, ALA127D, ALA130C, ALA130D, ALA131C, ALA131D, ALA13C, ALA13D, ALA28D, ALA37C, ALA37D, ALA4C, ALA4D, ALA6C, ALA6D, ALA8C, ALA8D, ALA97C, ALA97D, ARG103C, ARG103D, ARG106C, ARG106D, ARG10C, ARG10D, ARG121C, ARG121D, ARG124C, ARG124D, ARG135C, ARG135D, ARG143C, ARG143D, ARG15C, ARG15D, ARG16C, ARG16D, ARG53C, ARG53D, ARG90C, ARG90D, ASN145C, ASN145D, ASN39C, ASN39D, ASP105C, ASP105D, ASP119C, ASP119D, ASP128C, ASP128D, ASP138C, ASP138D, ASP140C, ASP140D, ASP26C, ASP26D, ASP34C, ASP34D, ASP98C, ASP98D, GLN104C, GLN104D, GLN136C, GLN136D, GLN142C, GLN142D, GLN147C, GLN147D, GLN22C, GLN22D, GLN31C, GLN31D, GLN35C, GLN35D, GLN9C, GLN9D, GLU122C, GLU122D, GLU12C, GLU12D, GLU19C, GLU19D, GLU32C, GLU32D, GLU38C, GLU38D, GLU42C, GLU42D, GLU46C, GLU46D, GLU5C, GLU5D, GLY33C, GLY33D, ILE112C, ILE112D, ILE123C, ILE123D, ILE141C, ILE141D, ILE43C, ILE43D, LEU100C, LEU100D, LEU144C, LEU144D, LEU20C, LEU20D, LEU23C, LEU23D, LEU24C, LEU24D, LEU25D, LEU50C, LEU50D, LEU7C, LEU7D, LEU87C, LEU87D, LYS113C, LYS113D, LYS125C, LYS125D, LYS132C, LYS132D, LYS29C, LYS29D, PRO36C, PRO36D, PRO40C, PRO40D, SER102C, SER102D, SER108C, SER110D, SER94C, SER94D, THR101C, THR101D, TRP146C, TRP146D, TYR107C, TYR107D, TYR114C, TYR114D, TYR134C, TYR134D, TYR2C, TYR2D, VAL115C, VAL115D, VAL11C, VAL11D, VAL139C, VAL139D, VAL27C, VAL27D, VAL30C, VAL30D