3K7A
crystal structure of an rna polymerase ii-tfiib complex
Total interactions analyzed 55
Total true interactions 24
Strongest Interaction Chains A-B
Int. Res. 769
Norm. En. per Res. -4.2025
Hub Node A(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -353.4281 -211.4796 -2666.81 -3231.7177 769 158 59 109709 19 261 236
A-C -7.9072 8.7034 -67.6035 -66.8073 52 8 0 3282 0 16 17
A-E -66.7856 -64.2913 -551.786 -682.8629 210 36 17 23919 6 82 64
A-F -72.8158 -70.7443 -417.004 -560.5641 157 23 13 18375 1 46 42
A-H -42.8883 -4.5118 -400.354 -447.7541 139 31 11 17265 1 37 37
A-I -47.0313 -52.56 -330.977 -430.5682 137 25 3 14806 2 46 45
A-K -33.1405 -34.6276 -266.886 -334.6542 93 14 6 10366 3 22 21
A-M -20.7688 0.0 -174.757 -195.5258 172 24 0 9543 0 0 0
B-C -62.676 -96.3566 -490.193 -649.2256 169 25 4 18044 7 58 61
B-F 0.0 0.0 -7.689 -7.689 16 0 0 373 0 4 7
B-H 0.0 0.0 -0.2471 -0.2471 2 0 0 35 0 0 0
B-I -9.7651 -60.6796 -274.591 -345.0357 138 20 2 13060 2 45 48
B-J -31.0875 -21.8693 -423.911 -476.8679 141 28 7 18780 4 37 36
B-K -8.012 -29.2682 -88.9779 -126.2581 56 5 0 3441 3 16 20
B-L -59.4311 -70.8956 -238.297 -368.6237 106 16 10 10592 8 48 44
B-M 0.0 0.0 -80.809 -80.809 124 3 0 4276 0 0 0
C-H 0.0 -7.3876 -32.2149 -39.6025 24 0 1 1495 1 9 5
C-J -54.8843 -48.0977 -242.151 -345.1329 113 27 11 12390 6 42 29
C-K -49.4244 -32.5523 -510.945 -592.9216 153 36 16 23464 6 46 46
C-L -37.626 -34.0589 -146.266 -217.9508 59 9 9 5545 5 24 15
E-F 0.0 -16.2497 -26.3261 -42.5758 21 1 0 1196 0 5 7
H-K 0.0 0.0 -25.1603 -25.1603 27 1 0 1607 0 5 5
J-L 0.0 0.0 -3.8884 -3.8884 9 0 0 281 0 0 1
K-L 0.0 7.6356 -1.5742 6.0615 5 0 0 165 0 3 2