3K6T

crystal structure of the gld-1 homodimerization domain from caenorhabditis elegans at 2.04 a resolution

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 70
  • Norm. En. per Res.: -3.4612
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-44.668	8.4778	-198.653	-234.8431	70	9	7	7967	0	37	36
A-D	0.0	9.5001	-10.4451	-0.945	11	1	0	343	0	3	3
B-D	-15.3496	-28.9338	-41.3271	-85.6104	27	3	0	1529	2	6	7
C-D	-42.5225	10.5449	-210.309	-242.2866	70	15	8	8254	0	36	39

Interface residues

• A-B: ALA151A, ALA151B, ARG172A, ARG172B, ARG180A, ARG180B, ASN169A, ASN169B, ASP152A, ASP152B, ASP175A, ASP175B, ASP176A, ASP176B, GLU144A, GLU144B, GLU148A, GLU148B, GLU156A, GLU156B, GLU171A, GLU171B, GLU177A, GLU177B, HIS0A, HIS0B, HIS159A, HIS159B, HIS165B, ILE178A, ILE178B, LEU150A, LEU150B, LEU153A, LEU153B, LEU160A, LEU160B, LEU162A, LEU162B, LEU173A, LEU173B, LEU174A, LEU174B, LYS155A, LYS155B, LYS157A, LYS157B, LYS158A, LYS158B, MET166A, MET166B, PHE163A, PHE163B, PHE167A, PHE167B, PRO164B, SER-1A, SER-1B, SER168A, SER168B, THR161A, THR161B, TYR149A, TYR149B, VAL154A, VAL154B, VAL170A, VAL170B, VAL181A, VAL181B
• A-D: ASP152A, GLU148A, GLU156A, HIS159A, HIS165D, LEU162A, LEU162D, LYS155A, MET166D, PHE163D, PRO164D
• B-D: ARG172D, ASN169D, ASP175D, ASP176D, GLU171D, HIS165B, HIS165D, ILE178D, LEU160D, LEU162B, LEU162D, LEU173D, LEU174D, LYS157D, MET166B, MET166D, PHE163B, PHE163D, PHE167B, PHE167D, PRO164B, PRO164D, SER168B, SER168D, THR161B, THR161D, VAL170D
• C-D: ALA151C, ALA151D, ARG172C, ARG172D, ARG180C, ARG180D, ASN169C, ASN169D, ASP152C, ASP152D, ASP175C, ASP175D, ASP176C, ASP176D, GLU144C, GLU144D, GLU148C, GLU148D, GLU156C, GLU156D, GLU171C, GLU171D, GLU177C, GLU177D, HIS0C, HIS0D, HIS159C, HIS159D, HIS165D, ILE178C, ILE178D, LEU150C, LEU150D, LEU153C, LEU153D, LEU160C, LEU160D, LEU162C, LEU162D, LEU173C, LEU173D, LEU174C, LEU174D, LYS155C, LYS155D, LYS157C, LYS157D, LYS158C, LYS158D, MET166C, MET166D, PHE163C, PHE163D, PHE167C, PHE167D, PRO164D, SER-1C, SER-1D, SER168C, SER168D, THR161C, THR161D, TYR149C, TYR149D, VAL154C, VAL154D, VAL170C, VAL170D, VAL181C, VAL181D