3JX8

crystal structure of putative lipid binding protein (yp_001304415.1) from parabacteroides distasonis atcc 8503 at 2.16 a resolution

• Total interactions analyzed: 15
• Total true interactions: 7
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 35
  • Norm. En. per Res.: -5.4347
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-37.3797	0.0	-175.956	-213.3357	129	4	16	9064	0	2	6
A-C	-68.4306	-41.7584	-80.0268	-190.2158	35	6	0	3116	4	13	13
B-C	0.0	-3.9177	-46.0875	-50.0052	27	1	0	1628	0	12	6
B-E	-10.8801	-6.0637	-47.5831	-64.5269	42	2	0	2231	2	33	29
C-D	-37.2544	0.0	-176.024	-213.2784	128	4	16	9008	0	2	6
C-F	0.0	0.0	-0.0039	-0.0039	3	0	0	6	0	0	0
E-F	-44.0094	0.0	-183.361	-227.3704	129	5	16	9158	0	2	6

Interface residues

• A-B: ALA144A, ALA144B, ALA165A, ALA165B, ALA185A, ALA185B, ALA204A, ALA204B, ALA224A, ALA224B, ASN121A, ASN121B, ASN142A, ASN142B, ASN266A, ASN266B, ASN97A, ASN97B, ASN98A, ASN98B, ASN99A, ASN99B, ASP102A, ASP102B, GLU246A, GLU246B, GLY124A, GLY124B, GLY145A, GLY145B, GLY166A, GLY166B, GLY168A, GLY168B, GLY188B, GLY205A, GLY205B, GLY207A, GLY207B, GLY227A, GLY227B, GLY243A, GLY243B, GLY245A, GLY245B, GLY261A, GLY261B, GLY263A, GLY263B, GLY49A, GLY49B, GLY95A, GLY95B, ILE223A, ILE223B, ILE241A, ILE241B, ILE247A, ILE247B, ILE255A, ILE255B, ILE259A, ILE259B, ILE265A, ILE265B, ILE92A, ILE92B, LEU103A, LEU103B, LEU184A, LEU184B, LYS24A, LYS24B, LYS257A, LYS257B, LYS267A, LYS267B, PHE47A, PHE47B, PHE96A, PHE96B, PRO89A, PRO89B, SER100A, SER100B, SER125A, SER125B, SER146A, SER146B, SER167A, SER167B, SER186A, SER186B, SER187A, SER187B, SER206A, SER206B, SER225A, SER225B, SER226A, SER226B, SER244A, SER244B, SER258A, SER258B, SER262A, SER262B, SER264A, SER264B, SER91A, SER91B, THR122A, THR122B, THR46A, THR46B, TYR101A, TYR101B, TYR249A, TYR249B, TYR88A, TYR88B, VAL123A, VAL123B, VAL203A, VAL203B, VAL242A, VAL242B, VAL48A, VAL48B
• A-C: ARG35C, ASN266A, ASN29C, ASN31C, ASN71C, ASP238A, ASP252A, ASP69C, GLN235A, GLU254A, GLU33C, GLU36C, GLU70C, GLY251A, GLY30C, ILE236A, ILE255A, ILE265A, ILE68C, LEU237A, LYS109C, LYS257A, LYS267A, PHE73C, PRO253A, PRO32C, SER256A, SER258A, SER65C, THR234A, THR34C, THR67C, TYR249A, VAL107C, VAL268A
• B-C: ARG35C, ASN29C, ASN31C, ASN71C, ASN97B, ASN98B, ASP69C, ASP74C, GLU33C, GLU70C, GLU81B, GLY82B, GLY95B, ILE26C, ILE92B, LEU72C, LYS38C, LYS86B, LYS90C, LYS93B, LYS93C, LYS94B, PHE73C, PHE96B, SER91B, TYR101C, TYR75C
• B-E: ARG138B, ARG152E, ARG198B, ARG217B, ASN137B, ASN148E, ASN179B, ASP174E, ASP178B, ASP197B, ASP52E, ASP59B, GLN176B, GLU116B, GLU150E, GLU54E, GLY153E, GLY157B, GLY194E, ILE129E, ILE130E, ILE171E, ILE175E, ILE193E, LEU151E, LYS109E, LYS111E, LYS118B, LYS132E, LYS135B, LYS156B, LYS159B, LYS173E, LYS218B, PRO133E, PRO154E, SER131E, THR106E, THR195E, TYR158B, VAL107E, VAL136B
• C-D: ALA144C, ALA144D, ALA165C, ALA165D, ALA185C, ALA185D, ALA204C, ALA204D, ALA224C, ALA224D, ASN121C, ASN121D, ASN142C, ASN142D, ASN266C, ASN266D, ASN97C, ASN97D, ASN98C, ASN98D, ASN99C, ASN99D, ASP102C, ASP102D, GLU246C, GLU246D, GLY124C, GLY124D, GLY145C, GLY145D, GLY166C, GLY166D, GLY168C, GLY168D, GLY205C, GLY205D, GLY207C, GLY207D, GLY227C, GLY227D, GLY243C, GLY243D, GLY245C, GLY245D, GLY261C, GLY261D, GLY263C, GLY263D, GLY49C, GLY49D, GLY95C, GLY95D, ILE223C, ILE223D, ILE241C, ILE241D, ILE247C, ILE247D, ILE255C, ILE255D, ILE259C, ILE259D, ILE265C, ILE265D, ILE92C, ILE92D, LEU103C, LEU103D, LEU184C, LEU184D, LYS24C, LYS24D, LYS257C, LYS257D, LYS267C, LYS267D, PHE47C, PHE47D, PHE96C, PHE96D, PRO89C, PRO89D, SER100C, SER100D, SER125C, SER125D, SER146C, SER146D, SER167C, SER167D, SER186C, SER186D, SER187C, SER187D, SER206C, SER206D, SER225C, SER225D, SER226C, SER226D, SER244C, SER244D, SER258C, SER258D, SER262C, SER262D, SER264C, SER264D, SER91C, SER91D, THR122C, THR122D, THR46C, THR46D, TYR101C, TYR101D, TYR249C, TYR249D, TYR88C, TYR88D, VAL123C, VAL123D, VAL203C, VAL203D, VAL242C, VAL242D, VAL48C, VAL48D
• C-F: ARG104F, ARG25F, PRO133C
• E-F: ALA144E, ALA144F, ALA165E, ALA165F, ALA185E, ALA185F, ALA204E, ALA204F, ALA224E, ALA224F, ASN121E, ASN121F, ASN142E, ASN142F, ASN266E, ASN266F, ASN97E, ASN97F, ASN98E, ASN98F, ASN99E, ASN99F, ASP102E, ASP102F, GLU246E, GLU246F, GLY124E, GLY124F, GLY145E, GLY145F, GLY166E, GLY166F, GLY168E, GLY168F, GLY188E, GLY205E, GLY205F, GLY207E, GLY207F, GLY227E, GLY227F, GLY243E, GLY243F, GLY245E, GLY245F, GLY261E, GLY261F, GLY263E, GLY263F, GLY49E, GLY49F, GLY95E, GLY95F, ILE223E, ILE223F, ILE241E, ILE241F, ILE247E, ILE247F, ILE255E, ILE255F, ILE259E, ILE259F, ILE265E, ILE265F, ILE92E, ILE92F, LEU103E, LEU103F, LEU184E, LEU184F, LYS24E, LYS24F, LYS257E, LYS257F, LYS267E, LYS267F, PHE47E, PHE47F, PHE96E, PHE96F, PRO89E, PRO89F, SER100E, SER100F, SER125E, SER125F, SER146E, SER146F, SER167E, SER167F, SER186E, SER186F, SER187E, SER187F, SER206E, SER206F, SER225E, SER225F, SER226E, SER226F, SER244E, SER244F, SER258E, SER258F, SER262E, SER262F, SER264E, SER264F, SER91E, SER91F, THR122E, THR122F, THR46E, THR46F, TYR101E, TYR101F, TYR249E, TYR249F, TYR88E, TYR88F, VAL123E, VAL123F, VAL203E, VAL203F, VAL242E, VAL242F, VAL48E, VAL48F