3JTO

crystal structure of the c-terminal domain of ypbh

• Total interactions analyzed: 15
• Total true interactions: 11
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 51
  • Norm. En. per Res.: -3.9079
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-9.5297	9.9176	-128.61	-128.2221	52	4	5	4917	0	17	11
A-C	-18.3965	22.158	-102.798	-99.0364	44	4	0	3489	1	8	10
A-D	0.0	0.0	-0.0017	-0.0017	4	0	0	2	0	1	3
B-C	0.0	-25.1023	-16.6755	-41.7778	17	0	0	688	2	3	6
B-E	-14.2582	1.0844	-85.3051	-98.4789	30	3	0	2707	0	6	8
B-F	0.0	0.0	-0.0402	-0.0402	3	0	0	27	0	2	2
C-D	-39.47	6.4966	-166.33	-199.3034	51	5	5	5664	0	16	10
C-F	0.0	6.4959	-3.4649	3.031	9	0	0	148	1	1	1
D-E	0.0	0.0	-0.0121	-0.0121	3	0	0	9	0	1	3
D-F	0.0	-1.1914	-86.6782	-87.8696	34	1	0	2744	0	7	8
E-F	-10.182	-0.4556	-118.305	-128.9426	55	6	2	4863	0	18	13

Interface residues

• A-B: ALA85A, ALA85B, ASN84A, ASN84B, ASP15A, ASP15B, ASP82A, ASP82B, GLN18A, GLN18B, GLN39A, GLN90A, GLN90B, GLU14A, GLU14B, GLU21B, GLY38A, HIS11A, HIS11B, HIS35A, HIS35B, HIS92A, HIS92B, ILE16B, ILE17A, ILE17B, ILE80A, ILE80B, ILE89A, ILE89B, LEU79A, LEU79B, LYS78A, LYS78B, MET81A, MET81B, PHE10A, PHE13A, PHE13B, PHE93A, PHE93B, SER12A, SER12B, SER94A, THR88A, THR88B, THR91A, THR91B, TYR40A, TYR40B, VAL33A, VAL33B
• A-C: ALA60C, ARG72A, ARG72C, ASN64C, ASP15C, ASP37A, ASP37C, GLN39A, GLN39C, GLN9A, GLN9C, GLU14C, GLU61C, GLU75A, GLY38A, GLY38C, GLY63C, GLY77A, HIS11C, HIS35A, HIS35C, ILE80A, LEU59C, LEU68A, LEU68C, LEU73A, LEU73C, LEU79A, LYS78A, PHE10C, PHE41C, PRO65C, SER12C, THR66C, THR67A, THR67C, TYR34A, TYR36A, TYR36C, TYR40C, TYR62C, TYR71A, TYR76A, TYR8C
• A-D: ARG72A, ASP37A, GLN18D, HIS11D
• B-C: ALA52C, ALA57C, ALA60C, ARG25B, GLN18B, GLU21B, GLU53C, GLU61C, GLY54C, HIS50C, ILE26C, SER22B, THR51C, TYR62B, VAL55C, VAL56C, VAL58C
• B-E: ARG72B, ARG72E, ASN64B, ASP15B, ASP37B, ASP37E, GLN39B, GLN9B, GLU75E, GLY38B, GLY38E, GLY77E, HIS11B, HIS35B, HIS35E, LEU68B, LEU68E, LEU73B, LEU73E, LYS78E, PHE10B, PHE41B, PRO65B, SER12B, THR66B, THR67B, TYR36B, TYR36E, TYR71E, TYR76E
• B-F: ALA57B, ALA60B, ARG25F
• C-D: ASN84D, ASP15C, ASP15D, ASP82C, ASP82D, GLN18C, GLN18D, GLN90C, GLN90D, GLU14C, GLU14D, GLY38C, GLY38D, HIS11C, HIS11D, HIS35C, HIS35D, HIS92C, HIS92D, ILE16C, ILE16D, ILE17C, ILE17D, ILE80C, ILE80D, ILE89C, ILE89D, LEU79C, LEU79D, LYS78C, LYS78D, MET81C, MET81D, PHE13C, PHE13D, PHE93C, PHE93D, SER12C, SER12D, SER94C, SER94D, THR88C, THR88D, THR91C, THR91D, TYR34C, TYR34D, TYR40C, TYR40D, VAL33C, VAL33D
• C-F: ALA57F, ALA60F, ARG25C, ASN64F, GLU21C, GLU61F, PRO65F, SER94C, VAL58F
• D-E: ASP37D, GLN39D, HIS11E
• D-F: ARG72D, ARG72F, ASN64F, ASP15F, ASP37D, ASP37F, GLN39D, GLN39F, GLN9F, GLU75D, GLY38D, GLY38F, GLY77D, HIS11F, HIS35D, HIS35F, LEU68D, LEU68F, LEU73D, LEU73F, LEU79D, LYS78D, PHE10F, PHE41F, PRO65F, SER12F, THR66F, THR67F, THR69D, TYR36D, TYR36F, TYR40F, TYR71D, TYR76D
• E-F: ALA85E, ALA85F, ASN84E, ASN84F, ASP15E, ASP15F, ASP82E, ASP82F, GLN18F, GLN39E, GLN90E, GLN90F, GLU14E, GLU14F, GLU21F, GLY38E, GLY38F, GLY83E, HIS11E, HIS11F, HIS35E, HIS35F, HIS92E, HIS92F, ILE16E, ILE16F, ILE17E, ILE17F, ILE80E, ILE80F, ILE89E, ILE89F, LEU79E, LEU79F, LYS78E, LYS78F, MET81E, MET81F, PHE13E, PHE13F, PHE93E, SER12E, SER12F, SER94E, THR32E, THR88E, THR88F, THR91E, THR91F, TYR34E, TYR34F, TYR40E, TYR40F, VAL33E, VAL33F