3J0J
fitted atomic models of thermus thermophilus v-atpase subunits into cryo-em map
Total interactions analyzed 78
Total true interactions 21
Strongest Interaction Chains I-J
Int. Res. 205
Norm. En. per Res. -3.5463
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-D -4.9665 0.0 176.094 171.1275 173 87 13 7389 0 87 71
A-F -7.5829 0.0 1037.91 1030.3271 199 167 8 9005 0 118 102
A-G 0.0 0.0 -5.6018 -5.6018 38 0 5 738 0 26 10
B-D -14.5225 0.0 51.1392 36.6167 129 45 5 6024 0 72 51
B-E -33.1758 0.0 -59.0835 -92.2593 117 19 8 4838 0 56 54
B-G 0.0 0.0 -6.4548 -6.4548 35 0 1 743 0 29 18
B-H 0.0 0.0 -15.9478 -15.9478 22 14 6 1166 0 9 6
C-E -6.1867 0.0 378.291 372.1043 191 95 9 8070 0 107 92
C-F 0.0 0.0 -36.1982 -36.1982 142 20 8 4783 0 69 64
C-G 0.0 0.0 -9.1013 -9.1013 33 0 2 822 0 24 18
C-H 0.0 0.0 -0.0658 -0.0658 2 0 0 17 0 9 8
D-G 0.0 0.0 -7.7946 -7.7946 50 3 1 1161 0 38 41
E-G 0.0 0.0 -13.3545 -13.3545 36 3 3 1043 0 27 37
E-J -28.2317 0.0 397.077 368.8453 82 133 1 4235 0 35 37
F-G 0.0 0.0 -2.0894 -2.0894 20 0 0 340 0 11 21
F-L -48.2441 0.0 367.366 319.1219 97 75 3 5117 0 39 37
G-H 0.0 0.0 -27.8518 -27.8518 83 3 14 2862 0 36 47
G-M 0.0 0.0 -3.3799 -3.3799 19 0 0 434 0 17 12
H-M 0.0 0.0 -1.9942 -1.9942 18 0 0 300 0 8 6
I-J -49.7873 -190.6716 -486.53 -726.9888 205 38 60 24297 9 99 88
K-L -49.76 -190.7227 -486.038 -726.5207 205 37 60 24293 9 99 88