3IZX

3.1 angstrom cryoem structure of cytoplasmic polyhedrosis virus

• Total interactions analyzed: 10
• Total true interactions: 6
• Strongest Interaction:
  • Chains: B-D
  • Int. Res.: 229
  • Norm. En. per Res.: -2.9877
• Hub Node: B(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-17.0144	-20.4745	-185.207	-222.6959	161	34	3	10007	4	41	42
A-D	-10.6346	-52.3383	-140.798	-203.7709	77	8	3	6709	1	28	23
B-C	-81.3401	-103.6611	-565.106	-750.1072	301	98	10	29394	11	103	102
B-D	-125.0492	-118.1648	-440.966	-684.18	229	61	5	20583	4	74	67
B-E	-6.3987	-2.1854	-99.2854	-107.8695	59	11	3	5072	0	11	13
C-E	-26.5118	-109.6227	-158.002	-294.1366	103	15	5	7701	4	39	26

Interface residues

• A-B: ALA1327B, ALA1333B, ALA562B, ALA563B, ALA595B, ALA602B, ALA725B, ARG1021B, ARG1023B, ARG1326B, ARG1331B, ARG182A, ARG200A, ARG222A, ARG292A, ARG324A, ARG46A, ARG47A, ARG605B, ARG614B, ARG629B, ARG641B, ARG651B, ARG67A, ARG73A, ASN125A, ASN1329B, ASN1332B, ASN136A, ASN180A, ASN321A, ASN561B, ASN598B, ASN630B, ASN639B, ASN646B, ASN718B, ASN723B, ASP1032B, ASP1033B, ASP1036B, ASP160A, ASP163A, ASP173A, ASP174A, ASP226A, ASP229A, ASP322A, ASP591B, ASP616B, ASP617B, ASP66A, ASP730B, ASP777A, GLN1034B, GLN132A, GLN270A, GLN45A, GLN610B, GLN632B, GLN640B, GLU1038B, GLU224A, GLU565B, GLU647B, GLU64A, GLY131A, GLY158A, GLY564B, GLY596B, GLY642B, GLY68A, GLY722B, HIS220A, ILE1035B, ILE1037B, ILE1328B, ILE1330B, ILE159A, ILE162A, ILE164A, ILE228A, ILE550B, ILE560B, ILE601B, ILE620B, LEU1029B, LEU133A, LEU157A, LEU204A, LEU263A, LEU298A, LEU594B, LEU613B, LEU76A, LYS201A, LYS77A, MET199A, MET227A, PHE154A, PHE172A, PHE566B, PHE612B, PHE648B, PHE727B, PHE72A, PRO129A, PRO165A, PRO262A, PRO593B, PRO631B, PRO79A, SER123A, SER175A, SER176A, SER202A, SER223A, SER225A, SER264A, SER265A, SER266A, SER291A, SER294A, SER323A, SER48A, SER590B, SER628B, SER63A, SER650B, SER721B, THR124A, THR127A, THR128A, THR177A, THR203A, THR267A, THR295A, THR599B, THR608B, THR615B, THR638B, THR643B, THR645B, THR654B, THR658B, THR65A, THR726B, TYR120A, TYR126A, TYR161A, TYR268A, TYR320A, TYR634B, VAL130A, VAL134A, VAL135A, VAL153A, VAL205A, VAL269A, VAL592B, VAL644B
• A-D: ALA147D, ALA186A, ALA197A, ALA280D, ARG144D, ARG146D, ARG200A, ARG261D, ARG314A, ARG317A, ARG318A, ARG324A, ASN193A, ASN258D, ASN321A, ASN42D, ASP148D, ASP151D, ASP322A, GLN284D, GLN311A, GLN333A, GLU191A, GLU277D, GLU41D, GLU43D, GLU53D, HIS185A, HIS194A, HIS276D, ILE150D, ILE152D, ILE195A, ILE354A, LEU196A, LEU198A, LEU273D, LEU315A, LEU326A, LEU44D, LYS201A, LYS281D, LYS47D, MET149D, MET189A, MET199A, MET260D, MET319A, PHE355A, PRO143D, PRO173D, PRO187A, PRO350A, PRO50D, PRO52D, SER259D, SER274D, THR142D, THR188A, THR190A, THR262D, THR325A, THR352A, THR356A, THR40D, THR51D, TYR145D, TYR254D, TYR327A, TYR349A, TYR351A, TYR353A, VAL171D, VAL174D, VAL192A, VAL257D, VAL45D
• B-C: ALA1102B, ALA1145B, ALA1152B, ALA1157B, ALA1190B, ALA1196B, ALA1222B, ALA126C, ALA1327C, ALA239B, ALA241B, ALA396C, ALA417B, ALA459C, ALA578B, ALA649C, ALA657C, ALA660C, ALA667C, ALA675C, ALA695C, ALA697C, ALA969B, ARG1104B, ARG1114B, ARG1116B, ARG1144B, ARG117C, ARG1228B, ARG1319C, ARG1326C, ARG1331C, ARG421B, ARG571B, ARG605C, ARG641C, ARG651C, ARG653C, ARG677C, ARG685C, ARG747B, ARG776C, ARG833B, ARG862B, ARG968B, ARG980B, ASN1115B, ASN1154B, ASN122C, ASN1321C, ASN1329C, ASN1332C, ASN139C, ASN144C, ASN393C, ASN452C, ASN456C, ASN491B, ASN534B, ASN639C, ASN646C, ASN661C, ASN664C, ASN693C, ASN821B, ASP100C, ASP101C, ASP1025B, ASP1081B, ASP1153B, ASP1189B, ASP119C, ASP1226B, ASP1323C, ASP1324C, ASP142C, ASP230B, ASP531B, ASP576B, ASP670C, ASP671C, ASP692C, ASP700C, ASP828B, ASP853B, ASP921B, CYS679C, GLN1015B, GLN115C, GLN1186B, GLN1205B, GLN124C, GLN388C, GLN394C, GLN455C, GLN457C, GLN577B, GLN610C, GLN640C, GLN669C, GLN673C, GLN682C, GLN690C, GLN748B, GLN777C, GLN854B, GLN978B, GLU1143B, GLU1191B, GLU1225B, GLU123C, GLU1318C, GLU242B, GLU494B, GLU573B, GLU647C, GLU665C, GLU688C, GLU738B, GLU746B, GLU750B, GLU789C, GLU790C, GLU943B, GLU947B, GLY1026B, GLY1146B, GLY1199B, GLY1224B, GLY140C, GLY236B, GLY391C, GLY395C, GLY642C, GLY739B, GLY749B, GLY827B, HIS1103B, HIS1187B, HIS1203B, HIS390C, HIS584B, HIS686C, HIS701C, HIS858B, HIS942B, HIS981B, ILE1022B, ILE1076B, ILE1155B, ILE1156B, ILE1160B, ILE1193B, ILE1230B, ILE137C, ILE235B, ILE655C, ILE694C, ILE757B, ILE791C, ILE948B, ILE96C, ILE979B, LEU1012B, LEU1079B, LEU1110B, LEU1150B, LEU1204B, LEU1229B, LEU141C, LEU231B, LEU232B, LEU453C, LEU579B, LEU581B, LEU684C, LEU774C, LEU824B, LEU856B, LEU946B, LEU974B, LYS1013B, LYS109C, LYS1113B, LYS1149B, LYS1161B, LYS1198B, LYS135C, LYS497B, LYS574B, LYS674C, LYS681C, LYS742B, MET1014B, MET1077B, MET1147B, MET1194B, MET1207B, MET1227B, MET672C, MET832B, MET971B, PHE1106B, PHE1206B, PHE121C, PHE125C, PHE138C, PHE389C, PHE612C, PHE691C, PRO1024B, PRO1084B, PRO110C, PRO1131B, PRO1197B, PRO1322C, PRO132C, PRO234B, PRO392C, PRO420B, PRO450C, PRO737B, PRO743B, PRO773C, PRO920B, PRO972B, SER1011B, SER1107B, SER1108B, SER1109B, SER1148B, SER1158B, SER116C, SER1192B, SER1223B, SER386C, SER458C, SER582B, SER650C, SER678C, SER736B, SER740B, SER829B, SER857B, SER944B, SER975B, SER977B, THR1009B, THR1027B, THR1080B, THR1118B, THR112C, THR118C, THR1195B, THR133C, THR134C, THR238B, THR387C, THR557B, THR608C, THR638C, THR643C, THR645C, THR654C, THR676C, THR689C, THR751B, THR973B, THR976B, TRP575B, TYR1078B, TYR1101B, TYR1184B, TYR1231B, TYR580B, TYR741B, TYR793C, TYR852B, VAL1074B, VAL1117B, VAL114C, VAL1151B, VAL1159B, VAL1188B, VAL120C, VAL1320C, VAL1325C, VAL136C, VAL143C, VAL233B, VAL237B, VAL644C, VAL656C, VAL668C, VAL696C, VAL733B, VAL775C, VAL830B, VAL831B, VAL945B, VAL99C
• B-D: ALA1039B, ALA1282B, ALA16D, ALA177D, ALA200D, ALA237D, ALA263D, ALA267D, ALA26D, ALA364B, ALA368B, ALA372B, ALA396B, ALA39D, ALA402B, ALA71D, ALA75D, ALA81D, ALA86D, ALA884B, ALA885B, ALA889B, ALA893B, ALA949B, ALA955B, ALA963B, ARG1041B, ARG1044B, ARG1053B, ARG1060B, ARG1272B, ARG176D, ARG191D, ARG20D, ARG242D, ARG247D, ARG250D, ARG261D, ARG265D, ARG275D, ARG333B, ARG338B, ARG363B, ARG410B, ARG60D, ARG629B, ARG848B, ARG911B, ARG92D, ARG965B, ASN113D, ASN1273B, ASN1283B, ASN195D, ASN21D, ASN238D, ASN241D, ASN25D, ASN369B, ASN393B, ASN61D, ASN623B, ASN65D, ASN83D, ASN85D, ASN867B, ASN913B, ASP1033B, ASP108D, ASP1275B, ASP192D, ASP22D, ASP249D, ASP272D, ASP335B, ASP373B, ASP374B, ASP404B, ASP406B, ASP70D, ASP950B, ASP953B, ASP956B, ASP962B, GLN1285B, GLN14D, GLN394B, GLN74D, GLN82D, GLN888B, GLN954B, GLN959B, GLU1038B, GLU1049B, GLU1292B, GLU13D, GLU183D, GLU253D, GLU331B, GLU367B, GLU38D, GLU400B, GLU69D, GLU912B, GLU914B, GLU947B, GLY109D, GLY1274B, GLY1284B, GLY1287B, GLY184D, GLY23D, GLY264D, GLY395B, GLY64D, GLY78D, GLY88D, HIS405B, HIS407B, HIS87D, HIS891B, ILE1037B, ILE111D, ILE1288B, ILE187D, ILE198D, ILE19D, ILE269D, ILE360B, ILE68D, ILE72D, ILE79D, ILE865B, ILE948B, ILE951B, LEU1050B, LEU1052B, LEU1055B, LEU1270B, LEU1276B, LEU1277B, LEU1291B, LEU12D, LEU199D, LEU252D, LEU334B, LEU339B, LEU365B, LEU401B, LEU946B, LYS1290B, LYS178D, LYS197D, LYS243D, LYS377B, MET260D, MET366B, PHE1040B, PHE15D, PHE17D, PHE403B, PHE77D, PHE90D, PHE952B, PHE957B, PRO1280B, PRO1289B, PRO63D, PRO869B, SER1043B, SER1056B, SER1271B, SER188D, SER190D, SER259D, SER274D, SER36D, SER80D, SER886B, SER961B, THR1063B, THR1269B, THR18D, THR245D, THR24D, THR262D, THR266D, THR268D, THR270D, THR332B, THR371B, THR40D, THR73D, THR866B, THR890B, THR960B, TRP1042B, TRP182D, TRP196D, TRP37D, TYR1031B, TYR1045B, TYR1278B, TYR254D, TYR271D, TYR336B, TYR67D, TYR89D, VAL110D, VAL1281B, VAL1286B, VAL1293B, VAL193D, VAL194D, VAL239D, VAL240D, VAL244D, VAL248D, VAL251D, VAL337B, VAL370B, VAL62D, VAL66D, VAL84D, VAL868B, VAL887B, VAL892B, VAL915B, VAL964B
• B-E: ALA1111B, ALA1127B, ALA147E, ALA263E, ALA280E, ALA81E, ARG1114B, ARG1116B, ARG1134B, ARG144E, ARG146E, ARG261E, ARG275E, ASN1112B, ASN1115B, ASN258E, ASN83E, ASN85E, ASP148E, ASP151E, ASP272E, GLN82E, GLU277E, GLY1125B, GLY1133B, GLY264E, HIS1121B, HIS276E, ILE150E, ILE152E, LEU1110B, LEU273E, LYS1113B, LYS47E, MET1126B, MET149E, MET260E, PRO1129B, PRO1135B, PRO143E, SER1107B, SER1108B, SER1109B, SER1130B, SER141E, SER274E, SER80E, THR1118B, THR1120B, THR1124B, THR1132B, THR142E, THR262E, THR270E, TYR1119B, TYR1128B, TYR271E, VAL1117B, VAL84E
• C-E: ALA263E, ALA267E, ALA368C, ALA372C, ALA396C, ALA81E, ALA949C, ALA955C, ARG1053C, ARG1272C, ARG191E, ARG20E, ARG247E, ARG250E, ARG261E, ARG265E, ARG275E, ARG333C, ARG338C, ARG363C, ASN1273C, ASN21E, ASN238E, ASN241E, ASN359C, ASN369C, ASN393C, ASN83E, ASN98C, ASP100C, ASP101C, ASP1275C, ASP180E, ASP22E, ASP249E, ASP272E, ASP335C, ASP373C, ASP953C, ASP956C, GLN1285C, GLN394C, GLN74E, GLN82E, GLN954C, GLU1049C, GLU183E, GLU331C, GLU367C, GLY1274C, GLY184E, GLY23E, GLY264E, GLY395C, GLY78E, ILE187E, ILE269E, ILE343C, ILE79E, LEU1270C, LEU1291C, LEU186E, LEU189E, LEU334C, LEU339C, LEU34E, LEU362C, LEU365C, LEU397C, LYS243E, LYS246E, LYS341C, MET260E, MET366C, PHE179E, PHE31E, SER1271C, SER1303C, SER181E, SER185E, SER188E, SER190E, SER259E, SER80E, THR245E, THR24E, THR262E, THR266E, THR268E, THR270E, THR332C, THR342C, THR371C, TRP182E, TYR336C, VAL239E, VAL240E, VAL244E, VAL248E, VAL337C, VAL340C, VAL370C, VAL99C