3IZB
localization of the small subunit ribosomal proteins into a 6.1 a cryo-em map of saccharomyces cerevisiae translating 80s ribosome
Total interactions analyzed 406
Total true interactions 44
Strongest Interaction Chains H-L
Int. Res. 26
Norm. En. per Res. -3.5455
Hub Node A(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
Download
Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
a-A 0.0 4.8009 -3.6827 1.1182 18 0 0 321 0 15 11
a-B 0.0 0.0 -13.0424 -13.0424 21 1 0 528 0 0 0
a-I -12.4755 3.9968 -96.4285 -104.9072 49 35 1 4534 0 11 19
A-B 0.0 0.0 -34.5226 -34.5226 15 7 0 875 0 0 0
A-E -13.5058 -41.9057 -391.093 -446.5045 130 25 8 16150 4 43 40
B-C 0.0 0.0 -0.0015 -0.0015 2 0 0 1 0 0 0
B-E 0.0 10.3733 -22.5121 -12.1388 21 1 1 1138 0 2 9
B-J 0.0 -4.5301 -57.8042 -62.3343 48 0 1 2914 1 20 13
B-N 0.0 -8.8982 -81.2997 -90.1979 47 1 0 3582 0 23 11
B-Q 0.0 -25.8337 -135.961 -161.7947 55 6 0 5843 2 24 27
D-P 0.0 0.0 -0.5784 -0.5784 7 0 0 70 0 5 2
D-b 0.0 0.0 -46.1377 -46.1377 31 1 0 2022 0 0 0
C-E 0.0 -7.7926 -46.835 -54.6276 46 0 0 2634 0 10 8
C-L 0.0 1.947 -5.6078 -3.6608 35 0 0 867 0 6 7
C-Z 0.0 0.0 -2.1565 -2.1565 3 0 0 113 0 0 0
E-H -10.1766 -3.7959 -228.018 -241.9905 89 17 3 8947 3 20 23
G-H 0.0 0.0 -23.456 -23.456 29 1 0 1223 0 0 0
G-O 0.0 0.0 -24.3942 -24.3942 35 0 0 1960 0 0 0
F-I -17.977 -14.8289 -161.492 -194.2979 85 19 1 7368 2 20 32
F-K 0.0 -7.0374 -24.7535 -31.7909 22 1 0 1359 0 7 5
F-S 0.0 6.7154 -1.2133 5.5022 8 0 0 227 0 0 4
F-V -6.4106 16.5641 -145.252 -135.0985 67 12 7 7076 0 13 28
F-Y -4.6701 16.6296 -188.602 -176.6425 82 17 1 8935 1 34 39
H-L -8.1902 -7.7634 -76.2288 -92.1825 26 10 0 3045 0 6 10
H-O 0.0 0.0 -20.5282 -20.5282 13 0 0 1120 0 4 6
H-P 0.0 0.0 -6.3169 -6.3169 13 0 1 497 0 0 0
I-J 0.0 -9.1343 -37.2609 -46.3952 27 2 0 1818 0 5 7
I-N 0.0 0.0 -0.0309 -0.0309 2 0 0 11 0 0 0
I-S -10.0879 2.5982 -80.6334 -88.1231 36 6 4 3577 0 5 9
J-N -21.7548 20.4489 -167.249 -168.5548 54 28 0 5932 0 10 17
K-W 0.0 0.0 -87.8428 -87.8428 79 11 0 5870 0 0 0
K-Y 0.0 0.0 -17.318 -17.318 29 0 0 1157 0 5 5
L-P -32.493 2.1918 142.459 112.1578 31 105 1 5778 0 0 10
M-R -3.5598 72.9339 -227.138 -157.7638 76 21 4 9577 0 10 34
M-S 0.0 -6.2893 -109.019 -115.3083 41 8 0 4200 0 18 10
M-V -8.0086 -7.5782 -70.3664 -85.9532 36 14 0 3959 3 19 21
N-Q 0.0 34.9653 -82.1046 -47.1393 46 5 1 3837 0 4 26
N-R 0.0 0.0 -0.2298 -0.2298 3 0 0 48 0 0 0
O-P 0.0 0.0 -0.4856 -0.4856 4 0 0 67 0 0 0
O-X -8.4143 12.3225 -116.532 -112.6237 43 29 1 4884 0 4 5
Q-Z -5.4412 5.7139 -59.5065 -59.2338 33 6 1 2898 0 15 15
R-Z 0.0 0.0 -0.6249 -0.6249 2 0 0 46 0 0 1
T-W 0.0 0.0 -35.2991 -35.2991 77 22 0 4135 0 0 0
W-Y 0.0 0.0 -16.997 -16.997 21 3 0 1413 0 0 0