3IYO

cryo-em model of virion-sized hev virion-sized capsid

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 75
  • Norm. En. per Res.: -0.0925
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-5.68	-5.68	77	0	0	925	0	0	0
A-D	0.0	0.0	-6.936	-6.936	75	0	0	1130	0	0	0
B-D	0.0	0.0	-1.1101	-1.1101	28	0	0	281	0	0	0

Interface residues

• A-B: ALA190B, ALA303B, ALA504A, ALA504B, ALA597A, ALA602A, ARG133A, ARG133B, ARG134A, ARG134B, ARG189B, ARG193B, ARG542A, ARG542B, ASN137B, ASN171A, ASN171B, ASP118A, ASP124A, GLN135A, GLU243B, GLU549A, GLU549B, GLY543A, GLY543B, GLY551A, GLY551B, HIS173A, ILE131A, ILE131B, ILE192B, ILE246B, LEU132A, LEU132B, LEU244B, LEU545A, LEU545B, LYS544A, LYS544B, LYS554A, LYS554B, PHE547A, PHE547B, PRO120A, PRO121A, PRO247B, PRO456A, PRO456B, PRO603A, SER248A, SER248B, SER455B, SER546A, SER546B, SER596A, THR119A, THR119B, THR172A, THR172B, THR191B, THR505A, THR552A, THR552B, THR553A, THR553B, TRP548A, TRP548B, TYR136B, VAL122A, VAL245B, VAL470A, VAL470B, VAL503A, VAL503B, VAL598A, VAL598B, VAL600A
• A-D: ALA130A, ALA183A, ALA391D, ALA457A, ARG128A, ARG233D, ARG250D, ARG254A, ARG254D, ARG309A, ARG460A, ASN181A, ASN255A, ASN255D, ASN310A, ASN315A, ASN418D, ASP124A, ASP126A, ASP231D, ASP430D, ASP522A, GLN184A, GLN214D, GLN256A, GLU262A, GLU417D, GLY129A, GLY265A, GLY314A, GLY381D, GLY382D, GLY523A, HIS429D, ILE131A, ILE227D, ILE234D, ILE388D, LEU235D, LEU244D, LEU311A, LEU380D, PRO219D, PRO247D, PRO313A, PRO384D, PRO452A, PRO454A, PRO458A, PRO461A, SER127A, SER221D, SER226D, SER229D, SER260A, SER389D, SER415D, SER459A, THR216D, THR217D, THR218D, THR220D, THR228D, THR230D, THR312A, THR385D, THR414D, THR453A, TRP212D, TYR253D, VAL125A, VAL222D, VAL232D, VAL261A, VAL266A
• B-D: ALA201B, ALA201D, ALA206D, ARG195B, ASN137B, ASN200B, ASN200D, ASN225D, GLN237D, GLY203D, GLY204D, LEU138B, LEU197B, PRO196B, PRO199B, PRO238D, SER139B, SER229D, SER287D, THR140B, THR228D, THR289B, TYR136B, TYR205D, TYR288B, TYR288D, VAL198B, VAL202D