3ICE

rho transcription termination factor bound to rna and adp- bef3

• Total interactions analyzed: 21
• Total true interactions: 8
• Strongest Interaction:
  • Chains: D-E
  • Int. Res.: 158
  • Norm. En. per Res.: -3.2553
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-57.5797	-15.6037	-294.494	-367.6775	149	49	0	15290	13	98	89
A-C	0.0	0.0	-0.0014	-0.0014	2	0	0	1	0	0	1
A-F	-38.2528	-74.294	-296.96	-409.5068	140	25	1	13477	13	88	88
B-C	-69.3616	-47.9809	-314.228	-431.5705	146	38	0	14499	18	99	90
B-F	0.0	0.0	-0.0442	-0.0442	3	0	0	24	0	0	0
C-D	-55.3568	-63.7951	-336.743	-455.8948	160	38	0	15311	23	100	95
D-E	-87.717	-85.0106	-341.616	-514.3436	158	47	0	15585	20	93	92
E-F	-53.9071	-148.7686	-184.679	-387.3547	132	33	1	9926	13	76	87

Interface residues

• A-B: ALA141B, ALA165B, ALA182A, ALA236A, ALA280A, ALA291B, ALA293A, ALA303B, ALA304B, ALA350A, ARG173B, ARG212A, ARG221A, ARG269A, ARG272A, ARG299B, ARG305B, ARG347A, ARG353A, ARG362B, ARG366B, ARG384B, ASN275A, ASN292B, ASN306B, ASN340B, ASN361B, ASP210A, ASP233A, ASP290A, ASP290B, ASP322A, ASP328A, ASP359B, GLN172B, GLN189A, GLN193A, GLN220A, GLU134B, GLU211A, GLU214A, GLU215A, GLU218A, GLU234A, GLU308B, GLU309B, GLU329A, GLU329B, GLU333B, GLU334B, GLU342B, GLU351A, GLU368B, GLU397A, GLY171B, GLY174B, GLY183A, GLY282A, GLY282B, GLY287A, GLY287B, GLY288A, GLY288B, GLY302B, GLY324A, GLY337B, GLY339B, GLY364B, HIS140B, HIS239A, HIS295B, HIS344B, HIS388B, ILE321A, ILE331B, ILE349A, ILE386B, ILE387B, ILE393A, LEU136B, LEU139B, LEU164B, LEU175B, LEU222A, LEU285A, LEU285B, LEU294B, LEU320A, LEU343B, LEU370B, LEU377B, LYS181A, LYS184A, LYS251B, LYS283A, LYS283B, LYS298B, LYS326A, LYS326B, LYS336B, LYS348A, LYS352A, LYS367B, LYS385B, PHE133B, PHE232A, PHE300B, PHE301B, PHE335B, PHE355A, PRO138B, PRO167B, PRO179A, PRO180A, PRO213A, PRO235A, PRO279A, PRO389B, SER166B, SER230A, SER266A, SER281A, SER325A, SER363B, THR137B, THR185A, THR217A, THR231A, THR276A, THR286A, THR286B, THR323A, THR338B, THR365B, TRP381B, TYR274A, TYR332B, TYR360B, VAL177B, VAL216A, VAL277A, VAL278A, VAL284A, VAL284B, VAL289A, VAL289B, VAL307B, VAL330B, VAL354A
• A-C: LYS326A, THR286C
• A-F: ALA141A, ALA165A, ALA182F, ALA236F, ALA280F, ALA291A, ALA291F, ALA293F, ALA303A, ALA304A, ALA350F, ARG173A, ARG212F, ARG221F, ARG269F, ARG272F, ARG299A, ARG305A, ARG347F, ARG353F, ARG362A, ARG366A, ARG384A, ASN135A, ASN275F, ASN306A, ASN340A, ASN361A, ASP210F, ASP233F, ASP290F, ASP322F, ASP328F, ASP359A, GLN172A, GLN189F, GLN220F, GLU134A, GLU211F, GLU214F, GLU215F, GLU218F, GLU234F, GLU308A, GLU329A, GLU333A, GLU334A, GLU342A, GLU351F, GLU368A, GLU397F, GLY171A, GLY174A, GLY183F, GLY282A, GLY282F, GLY287F, GLY288F, GLY302A, GLY324F, GLY337A, GLY339A, GLY364A, HIS140A, HIS239F, HIS295A, HIS344A, HIS388A, ILE131A, ILE321F, ILE349F, ILE382A, ILE386A, ILE387A, ILE393F, ILE400F, LEU136A, LEU139A, LEU164A, LEU175A, LEU222F, LEU285A, LEU285F, LEU294A, LEU320F, LEU343A, LEU370A, LEU377A, LYS181F, LYS184F, LYS251A, LYS283A, LYS283F, LYS298A, LYS31F, LYS326A, LYS326F, LYS336A, LYS348F, LYS352F, LYS367A, LYS385A, PHE232F, PHE300A, PHE301A, PHE335A, PHE355F, PRO138A, PRO167A, PRO179F, PRO180F, PRO213F, PRO235F, PRO279F, PRO389A, SER166A, SER281F, SER325F, SER363A, THR137A, THR185F, THR217F, THR231F, THR276F, THR286A, THR286F, THR323F, THR338A, THR365A, TRP381A, TYR332A, TYR360A, VAL216F, VAL277F, VAL278F, VAL284A, VAL284F, VAL289F, VAL330A, VAL354F
• B-C: ALA141C, ALA165C, ALA182B, ALA236B, ALA291B, ALA291C, ALA293B, ALA303C, ALA304C, ALA350B, ARG173C, ARG212B, ARG221B, ARG269B, ARG272B, ARG299C, ARG305C, ARG347B, ARG353B, ARG362C, ARG366C, ARG384C, ASN142C, ASN190B, ASN275B, ASN292C, ASN306C, ASN340C, ASN361C, ASP210B, ASP233B, ASP290B, ASP322B, ASP328B, GLN172C, GLN189B, GLN220B, GLU134C, GLU211B, GLU214B, GLU215B, GLU218B, GLU234B, GLU308C, GLU309C, GLU329C, GLU333C, GLU334C, GLU342C, GLU351B, GLU368C, GLU397B, GLY171C, GLY174C, GLY183B, GLY282B, GLY282C, GLY287B, GLY287C, GLY288B, GLY288C, GLY302C, GLY324B, GLY337C, GLY339C, GLY364C, HIS140C, HIS239B, HIS295C, HIS344C, HIS388C, ILE321B, ILE331C, ILE349B, ILE386C, ILE387C, ILE393B, LEU136C, LEU139C, LEU164C, LEU175C, LEU222B, LEU285B, LEU285C, LEU294C, LEU320B, LEU343C, LEU370C, LEU377C, LYS181B, LYS184B, LYS251C, LYS283B, LYS283C, LYS298C, LYS326B, LYS326C, LYS336C, LYS348B, LYS352B, LYS367C, LYS385C, PHE133C, PHE232B, PHE300C, PHE301C, PHE335C, PHE355B, PRO138C, PRO167C, PRO179B, PRO180B, PRO213B, PRO235B, PRO279B, PRO389C, SER166C, SER237B, SER281B, SER281C, SER325B, SER363C, THR137C, THR185B, THR217B, THR231B, THR276B, THR286B, THR286C, THR323B, THR338C, THR365C, TRP381C, TYR274B, TYR332C, TYR360C, VAL177C, VAL216B, VAL277B, VAL278B, VAL284B, VAL284C, VAL289B, VAL289C, VAL330C, VAL354B
• B-F: LYS326B, LYS326F, THR286B
• C-D: ALA141D, ALA165D, ALA182C, ALA236C, ALA273C, ALA280C, ALA291C, ALA291D, ALA293C, ALA293D, ALA303D, ALA304D, ALA350C, ARG128D, ARG173D, ARG212C, ARG221C, ARG238C, ARG269C, ARG272C, ARG28C, ARG299D, ARG305D, ARG347C, ARG353C, ARG362D, ARG366D, ARG384D, ASN129D, ASN142D, ASN275C, ASN292D, ASN306D, ASN340D, ASN361D, ASN401C, ASP210C, ASP233C, ASP290C, ASP290D, ASP322C, ASP328C, GLN172D, GLN189C, GLN220C, GLN378D, GLU125D, GLU134D, GLU211C, GLU214C, GLU215C, GLU218C, GLU234C, GLU308D, GLU309D, GLU329C, GLU329D, GLU333D, GLU334D, GLU342D, GLU351C, GLU368D, GLU369D, GLU397C, GLY171D, GLY174D, GLY183C, GLY282C, GLY282D, GLY287C, GLY287D, GLY288C, GLY288D, GLY302D, GLY324C, GLY337D, GLY339D, GLY364D, HIS140D, HIS239C, HIS295D, HIS344D, HIS388D, ILE321C, ILE321D, ILE331C, ILE331D, ILE349C, ILE382D, ILE393C, LEU136D, LEU139D, LEU164D, LEU222C, LEU285C, LEU285D, LEU294D, LEU320C, LEU343D, LEU370D, LEU377D, LYS181C, LYS184C, LYS251D, LYS283C, LYS283D, LYS298D, LYS326C, LYS326D, LYS336D, LYS348C, LYS352C, LYS367D, LYS385D, PHE133D, PHE232C, PHE300D, PHE301D, PHE335D, PHE355C, PRO138D, PRO167D, PRO179C, PRO180C, PRO213C, PRO235C, PRO279C, PRO389D, SER166D, SER237C, SER266C, SER281C, SER281D, SER325C, SER363D, THR137D, THR185C, THR217C, THR231C, THR276C, THR286C, THR286D, THR323C, THR338D, THR365D, TRP381D, TYR274C, TYR332D, TYR360D, VAL177D, VAL216C, VAL277C, VAL278C, VAL284C, VAL284D, VAL289C, VAL289D, VAL307D, VAL330D, VAL354C
• D-E: ALA141E, ALA165E, ALA182D, ALA236D, ALA273D, ALA280D, ALA291D, ALA291E, ALA293D, ALA293E, ALA303E, ALA304E, ALA350D, ARG128E, ARG173E, ARG212D, ARG221D, ARG238D, ARG269D, ARG272D, ARG299E, ARG305E, ARG30D, ARG347D, ARG353D, ARG362E, ARG366E, ARG384E, ASN129E, ASN142E, ASN275D, ASN292D, ASN292E, ASN306E, ASN340E, ASN361E, ASP210D, ASP233D, ASP290D, ASP290E, ASP322D, ASP328D, GLN189D, GLN220D, GLU134E, GLU211D, GLU214D, GLU215D, GLU218D, GLU234D, GLU308E, GLU309E, GLU329D, GLU329E, GLU333E, GLU334E, GLU342E, GLU351D, GLU368E, GLU397D, GLY171E, GLY174E, GLY183D, GLY282D, GLY282E, GLY287D, GLY287E, GLY288D, GLY302E, GLY324D, GLY337E, GLY339E, GLY364E, HIS140E, HIS239D, HIS295E, HIS344E, HIS388E, ILE131E, ILE321D, ILE321E, ILE331D, ILE331E, ILE349D, ILE393D, LEU136E, LEU139E, LEU164E, LEU175E, LEU187D, LEU222D, LEU285D, LEU285E, LEU294E, LEU320D, LEU343E, LEU370E, LEU377E, LYS130E, LYS181D, LYS184D, LYS251E, LYS283D, LYS283E, LYS298E, LYS326D, LYS326E, LYS336E, LYS348D, LYS352D, LYS367E, LYS385E, PHE133E, PHE232D, PHE300E, PHE301E, PHE335E, PHE355D, PRO138E, PRO167E, PRO179D, PRO180D, PRO213D, PRO235D, PRO279D, PRO389E, SER166E, SER237D, SER266D, SER281D, SER281E, SER325D, SER363E, THR137E, THR185D, THR217D, THR231D, THR276D, THR286D, THR286E, THR323D, THR338E, THR365E, TRP381E, TYR274D, TYR332E, TYR360E, VAL177E, VAL216D, VAL277D, VAL278D, VAL284D, VAL284E, VAL289D, VAL289E, VAL307E, VAL330E, VAL354D
• E-F: ALA141F, ALA182E, ALA236E, ALA280E, ALA291F, ALA293F, ALA303F, ALA304F, ALA350E, ARG173F, ARG212E, ARG221E, ARG238E, ARG269E, ARG272E, ARG296F, ARG299F, ARG305F, ARG347E, ARG353E, ARG362F, ARG366F, ARG384F, ASN129F, ASN275E, ASN292F, ASN306F, ASN340F, ASN361F, ASP210E, ASP233E, ASP290E, ASP322E, ASP328E, GLN172F, GLN189E, GLN220E, GLN378F, GLU134F, GLU211E, GLU214E, GLU215E, GLU218E, GLU234E, GLU308F, GLU329E, GLU329F, GLU333F, GLU334F, GLU342F, GLU351E, GLU368F, GLU369F, GLY171F, GLY183E, GLY282F, GLY287E, GLY287F, GLY288E, GLY302F, GLY324E, GLY337F, GLY339F, GLY364F, HIS140F, HIS239E, HIS295F, HIS344F, HIS388F, ILE247F, ILE331F, ILE349E, ILE382F, ILE393E, LEU136F, LEU139F, LEU187E, LEU285E, LEU285F, LEU294F, LEU320E, LEU370F, LEU377F, LYS181E, LYS184E, LYS251F, LYS283F, LYS298F, LYS326E, LYS336F, LYS348E, LYS352E, LYS367F, LYS385F, PHE133F, PHE232E, PHE300F, PHE301F, PHE335F, PHE355E, PRO138F, PRO180E, PRO213E, PRO235E, PRO279E, PRO297F, SER237E, SER266E, SER281F, SER325E, SER363F, THR137F, THR185E, THR217E, THR231E, THR276E, THR286F, THR323E, THR338F, THR365F, TRP381F, TYR332F, VAL11E, VAL216E, VAL277E, VAL278E, VAL284E, VAL284F, VAL289E, VAL289F, VAL307F, VAL330F