3I8E

crystal structure of ddb1 in complex with the h-box motif of wdr42a

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: B-D
  • Int. Res.: 75
  • Norm. En. per Res.: -2.477
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-14.2797	-14.2797	38	0	0	1076	0	9	12
A-C	-19.9647	-3.991	-162.319	-186.2748	77	15	8	7416	1	18	17
B-D	-30.9219	11.7414	-166.593	-185.7735	75	21	8	7738	1	15	16

Interface residues

• A-B: ALA539B, ALA982A, ALA983A, ARG1122A, ARG589B, ARG989A, ASN497B, ASN677B, ASN696B, ASP980A, ASP986A, GLN1015B, GLN456B, GLN634B, GLU1045A, GLU675B, GLU987A, GLU988A, GLY371B, GLY431B, GLY607B, ILE586B, ILE587B, LYS408B, LYS674B, LYS936A, LYS979A, MET1014B, MET1A, PRO588B, PRO635B, SER981A, THR984A, THR985A, TRP561B, TYR678B, VAL430B, VAL637B
• A-C: ALA154C, ALA157C, ALA381A, ALA813A, ALA834A, ALA841A, ALA869A, ARG159C, ARG161C, ARG327A, ARG722A, ASN1005A, ASN1034A, ASN810A, ASN885A, ASN970A, ASP361A, GLN153C, GLN845A, GLU160C, GLU162C, GLU312A, GLU787A, GLU811A, GLU839A, GLU840A, GLU842A, GLY164C, GLY357A, GLY380A, GLY832A, GLY868A, HIS789A, ILE359A, ILE740A, LEU155C, LEU158C, LEU163C, LEU328A, LEU736A, LEU814A, LEU912A, LEU926A, LYS723A, MET835A, MET910A, MET927A, MET954A, PHE1003A, PHE382A, PHE972A, PRO156C, PRO358A, PRO721A, PRO838A, PRO843A, SER165C, SER379A, SER720A, SER737A, SER738A, SER815A, SER955A, THR1032A, THR118A, THR833A, TRP953A, TYR812A, TYR837A, TYR871A, TYR913A, VAL1004A, VAL1006A, VAL1033A, VAL360A, VAL836A, VAL870A
• B-D: ALA154D, ALA157D, ALA381B, ALA813B, ALA834B, ALA841B, ALA869B, ALA911B, ARG159D, ARG161D, ARG327B, ARG722B, ASN1005B, ASN1034B, ASN885B, ASN970B, ASP361B, GLN153D, GLN845B, GLU160D, GLU162D, GLU312B, GLU787B, GLU811B, GLU839B, GLU840B, GLU842B, GLY164D, GLY357B, GLY380B, GLY868B, HIS789B, ILE359B, LEU155D, LEU158D, LEU163D, LEU328B, LEU736B, LEU814B, LEU912B, LEU926B, LYS723B, MET835B, MET910B, MET927B, MET954B, PHE1003B, PHE382B, PHE972B, PRO156D, PRO358B, PRO721B, PRO838B, PRO843B, SER165D, SER379B, SER720B, SER737B, SER738B, SER815B, SER955B, THR1032B, THR118B, THR833B, TRP953B, TYR812B, TYR837B, TYR871B, TYR913B, VAL1004B, VAL1006B, VAL1033B, VAL360B, VAL836B, VAL870B