3I4M
8-oxoguanine containing rna polymerase ii elongation complex d
Total interactions analyzed 105
Total true interactions 30
Strongest Interaction Chains C-L
Int. Res. 53
Norm. En. per Res. -5.801
Hub Node B(10)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -429.6272 -304.4287 -2606.5 -3340.5559 788 293 64 112954 23 263 244
A-C -7.3199 -0.7094 -58.2593 -66.2886 50 7 0 2848 0 17 18
A-D -8.4155 -9.0517 -65.4553 -82.9226 34 9 1 2882 1 12 6
A-E -109.4614 -72.4882 -563.326 -745.2756 201 58 14 23883 6 81 64
A-F -91.2858 -41.4944 -497.329 -630.1092 178 57 17 22398 2 61 55
A-G -31.801 -69.9209 -132.913 -234.6349 63 11 5 5487 3 21 17
A-H -51.4702 -18.303 -392.713 -462.4862 141 75 11 17738 3 36 35
A-I -104.6598 -37.6656 -419.044 -561.3694 137 54 12 16888 6 54 47
A-K -35.6827 -26.6883 -257.082 -319.453 95 24 9 10250 2 23 18
B-C -66.1187 -106.8433 -463.74 -636.702 167 55 4 18330 9 60 61
B-D -3.7837 -59.9324 -70.7569 -134.473 46 13 1 3590 3 16 19
B-E 0.0 0.0 -9.4833 -9.4833 9 4 0 526 0 2 1
B-F 0.0 1.3618 -19.9205 -18.5587 27 3 0 831 0 6 7
B-G -7.8167 -3.2242 -8.6344 -19.6752 24 0 0 749 0 6 4
B-H 0.0 0.0 -1.3991 -1.3991 4 0 0 64 0 0 0
B-I -5.8218 -82.3257 -299.867 -388.0145 137 31 2 13944 5 51 49
B-J -42.4372 -33.51 -401.569 -477.5162 138 57 7 18582 4 35 38
B-K -3.1312 -15.2283 -86.3263 -104.6858 58 12 0 3505 3 15 17
B-L -51.2758 -86.2397 -242.584 -380.0996 114 39 7 11483 11 52 46
C-H -8.0716 -8.4898 -34.2545 -50.8159 21 2 1 1462 1 8 6
C-J -57.0311 -25.1343 -233.217 -315.3824 113 46 11 13126 6 41 28
C-K -25.5386 -40.3528 -492.736 -558.6275 155 66 17 23945 7 46 51
C-L -46.6837 -70.434 -190.338 -307.4556 53 18 9 6519 6 25 16
D-F 0.0 0.0 -0.8469 -0.8469 10 0 0 173 0 2 5
D-G -60.8326 -15.7613 -586.515 -663.1089 208 79 26 27333 11 58 53
E-F -6.6392 -23.7814 -26.4892 -56.9098 22 5 0 1410 0 7 4
F-G -5.7015 -12.5924 -111.747 -130.0409 54 19 1 5036 1 11 12
H-K 0.0 0.0 -14.36 -14.36 27 9 0 1804 0 5 5
J-L -3.7629 0.0 -11.5553 -15.3182 10 1 0 538 0 1 1
K-L 0.0 7.7093 -1.0986 6.6107 5 0 0 143 0 2 2