3I1T
crystal structure of the e. coli 70s ribosome in an intermediate state of ratcheting
Total interactions analyzed 465
Total true interactions 29
Strongest Interaction Chains K-P
Int. Res. 76
Norm. En. per Res. -3.2043
Hub Node E(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
D-J 0.0 1.9647 -14.023 -12.0583 10 0 1 757 0 0 8
D-K -6.0097 -7.991 -25.6981 -39.6988 19 1 0 1047 0 3 6
D-N 0.0 2.8611 -16.7608 -13.8997 17 7 0 1069 0 0 9
D-P -5.2179 7.4109 -139.041 -136.8481 60 15 5 6743 2 13 14
E-L 0.0 2.1887 -77.7732 -75.5845 38 9 3 3953 0 8 7
E-Q 0.0 0.0 -0.5184 -0.5184 6 0 0 116 0 0 2
E-S 0.0 0.0 -0.001 -0.001 2 0 0 3 0 0 1
E-2 0.0 0.0 -0.1713 -0.1713 3 0 0 34 0 0 0
G-4 0.0 -6.953 -4.1136 -11.0665 10 0 0 309 0 3 4
H-X -3.0763 -15.8678 -31.156 -50.1002 41 7 0 2736 0 9 12
J-Q 0.0 -9.9689 -84.3051 -94.274 47 17 4 5018 0 9 21
J-R 0.0 3.911 -7.5887 -3.6777 11 0 0 805 0 1 4
K-P -34.1423 -32.7702 -176.613 -243.5255 76 12 3 7097 6 31 34
L-Q 0.0 0.0 -0.0038 -0.0038 6 0 0 4 0 0 2
L-R 0.0 3.2066 -39.2954 -36.0888 22 4 1 1506 0 0 12
L-3 -11.6131 11.7181 -166.355 -166.2499 55 16 5 7831 0 3 32
M-V -5.6068 -11.7693 -135.61 -152.9861 59 18 6 5737 0 6 13
M-W 0.0 0.0 -0.3 -0.3 6 0 0 54 0 0 0
M-4 0.0 0.0 -0.2579 -0.2579 3 0 0 56 0 1 1
N-S 0.0 0.0 -8.4415 -8.4415 9 0 0 400 0 2 1
N-0 -8.5682 12.081 -61.2435 -57.7307 39 7 4 3435 0 9 19
O-W 0.0 0.0 -0.8099 -0.8099 7 0 0 124 0 2 5
Q-R -19.9134 10.997 -211.32 -220.2364 96 39 9 10269 0 21 49
Q-0 0.0 0.0 -12.6487 -12.6487 14 3 0 617 0 0 6
S-0 -8.4074 -15.964 -85.0861 -109.4575 50 7 7 4142 2 10 7
T-Y 0.0 11.9997 -54.9307 -42.931 43 7 3 3282 0 8 16
T-2 0.0 0.0 -0.2 -0.2 4 0 0 65 0 1 4
W-3 0.0 0.0 -0.6265 -0.6265 3 0 0 79 0 2 2
1-3 0.0 1.6444 -11.6752 -10.0308 17 5 0 890 0 2 9