3I1P
crystal structure of the e. coli 70s ribosome in an intermediate state of ratcheting
Total interactions analyzed 465
Total true interactions 29
Strongest Interaction Chains K-P
Int. Res. 74
Norm. En. per Res. -3.2635
Hub Node E(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
D-J 0.0 1.8592 -13.299 -11.4398 10 0 1 724 0 0 8
D-K 0.0 -8.027 -28.6319 -36.6589 19 2 0 1058 0 3 6
D-N 0.0 3.3421 -25.0537 -21.7116 16 3 0 1070 0 0 9
D-P -5.8507 3.42 -138.588 -141.0187 60 16 5 6831 2 12 13
E-L 0.0 2.2407 -89.9408 -87.7001 37 10 4 4100 0 8 7
E-Q 0.0 0.0 -0.7282 -0.7282 6 0 0 151 0 0 2
E-S 0.0 0.0 -0.0028 -0.0028 2 0 0 4 0 0 1
E-2 0.0 0.0 -0.1292 -0.1292 3 0 0 28 0 0 0
G-4 0.0 -6.6459 -3.9184 -10.5643 10 0 0 303 0 3 4
H-X -3.1091 -17.0006 -29.0787 -49.1884 42 8 0 2718 0 9 12
J-Q 0.0 5.7098 -80.9995 -75.2897 48 15 4 4976 0 9 21
J-R 0.0 4.0758 -7.4492 -3.3734 11 0 0 825 0 1 4
K-P -41.6439 -30.8933 -168.964 -241.5012 74 15 3 7122 6 30 34
L-Q 0.0 0.0 -0.0039 -0.0039 6 0 0 4 0 0 2
L-R 0.0 3.3012 -36.0659 -32.7647 21 5 1 1524 0 0 12
L-3 -11.6006 11.6113 -172.243 -172.2322 55 14 7 7838 0 3 31
M-V -2.4635 -9.0688 -72.5817 -84.114 53 13 4 3885 0 4 12
M-W 0.0 0.0 -0.2989 -0.2989 6 0 0 54 0 0 0
M-4 0.0 0.0 -0.22 -0.22 3 0 0 51 0 1 1
N-S 0.0 0.0 -8.4842 -8.4842 9 0 0 405 0 2 1
N-0 -11.2345 12.133 -65.794 -64.8955 39 7 4 3529 0 9 18
O-W 0.0 -9.1838 -8.1715 -17.3554 18 1 0 455 0 3 8
Q-R -20.434 11.3137 -204.826 -213.9463 95 31 9 10136 0 21 50
Q-0 0.0 0.0 -13.939 -13.939 14 4 0 628 0 0 5
S-0 -5.681 -16.2988 -81.8093 -103.7892 51 6 7 4135 2 9 7
T-Y 0.0 11.9848 -51.1428 -39.158 42 7 3 3223 0 8 17
T-2 0.0 0.0 -0.221 -0.221 5 0 0 72 0 1 4
W-3 0.0 0.0 -0.725 -0.725 3 0 0 85 0 2 2
1-3 0.0 1.7308 -12.3229 -10.5921 19 4 0 877 0 2 10