3HZE

crystal structure of ycf54 protein from thermosynechococcus elongatus, northeast structural genomics consortium target ter59

• Total interactions analyzed: 15
• Total true interactions: 12
• Strongest Interaction:
  • Chains: A-E
  • Int. Res.: 46
  • Norm. En. per Res.: -3.455
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-10.3586	2.2502	-142.332	-150.4404	53	3	1	5512	5	44	40
A-C	-12.578	0.0	-15.9178	-28.4958	22	2	0	686	0	7	3
A-D	0.0	0.0	-6.0931	-6.0931	5	3	0	192	0	1	1
A-E	-17.42	-39.9435	-101.566	-158.9294	46	3	0	4103	3	20	18
B-D	-11.025	-23.2809	-31.3821	-65.688	26	1	1	1273	2	4	7
B-E	-20.8024	41.1575	-142.427	-122.0719	57	9	0	5290	4	24	20
C-D	-18.7959	-4.9564	-133.258	-157.0103	51	3	0	5154	9	42	38
C-E	0.0	-18.9567	-89.6385	-108.5952	34	3	0	3455	0	5	4
C-F	0.0	0.0	-1.3775	-1.3775	8	0	0	161	0	6	6
D-E	-3.0522	13.0088	-76.8379	-66.8813	30	3	2	2738	1	10	14
D-F	0.0	3.3914	-17.6573	-14.2659	16	2	0	828	0	17	11
E-F	-10.827	-25.5447	-289.495	-325.8667	122	19	16	12317	1	16	21

Interface residues

• A-B: ARG25B, ARG27A, ARG27B, ARG29A, ARG29B, ARG32B, ARG82A, ARG82B, ASN72A, GLN28A, GLN34A, GLN34B, GLN73A, GLN74A, GLN77A, GLU16B, GLU17B, GLU18B, GLU21B, GLU22A, GLU22B, GLU26A, GLU26B, GLU33A, GLU33B, GLU84A, GLU84B, HIS30A, HIS30B, ILE76A, LEU20B, LEU79A, LEU79B, LEU81A, LEU81B, LEU83A, LEU83B, LYS36A, LYS80A, PHE13B, PHE24B, PHE75A, PHE75B, PRO19B, THR15B, TRP78A, TRP78B, TYR31A, TYR31B, TYR85A, VAL23A, VAL23B, VAL86A
• A-C: ALA59A, ARG60A, ARG60C, ARG82C, CYS61A, GLN57A, GLN63A, GLN77C, GLU17A, GLU56A, GLU84C, LEU81C, LEU87A, LYS12A, LYS58A, LYS80C, PRO62A, PRO64A, SER10A, TYR85A, TYR85C, VAL86C
• A-D: GLU84A, GLU84D, LEU83A, TYR85A, TYR85D
• A-E: ALA59E, ARG25A, ARG29A, ARG60E, ARG82A, ARG82E, GLN57E, GLN73E, GLN77E, GLN90E, GLU16A, GLU17A, GLU18A, GLU21A, GLU22A, GLU26A, GLU56E, GLU84A, GLU84E, GLY89E, ILE76E, ILE7E, LEU14A, LEU20A, LEU79A, LEU79E, LEU81A, LEU81E, LEU83A, LEU83E, LEU87E, LYS12A, LYS80E, PHE13A, PHE24A, PRO19A, THR15A, THR3E, TRP78A, TRP78E, TYR5E, TYR6E, TYR85A, TYR85E, VAL23A, VAL86E
• B-D: ALA55D, ALA59D, ARG60B, ARG60D, ARG82B, CYS61D, GLN57D, GLN63D, GLN73B, GLN77B, GLU17D, GLU56D, GLU84B, LEU81B, LEU83B, LEU87B, LEU87D, LYS12D, LYS58D, LYS80B, PHE13D, PRO62D, SER10D, TYR85B, TYR85D, VAL86B
• B-E: ALA59E, ALA9E, ARG27B, ARG29B, ARG60E, ARG82B, ARG82E, ASN72B, ASP39B, CYS61E, GLN28B, GLN34B, GLN63E, GLN73B, GLN74B, GLN77B, GLU16E, GLU17E, GLU18E, GLU26B, GLU33B, GLU37B, GLU56E, GLU84E, GLY35B, HIS30B, ILE76B, LEU14E, LEU20E, LEU79E, LEU81B, LEU81E, LEU83E, LEU87E, LYS11E, LYS12E, LYS36B, LYS58E, LYS80E, PHE13E, PHE40B, PHE75B, PRO19E, PRO62E, PRO64E, SER10E, SER70B, THR15E, THR3B, THR71B, TRP78B, TYR31B, TYR4B, TYR5B, TYR85E, VAL23B, VAL86E
• C-D: ARG25C, ARG25D, ARG27C, ARG27D, ARG29C, ARG29D, ARG32C, ARG82C, ARG82D, ASN72D, GLN28D, GLN34C, GLN34D, GLN73D, GLN74C, GLN74D, GLN77D, GLU17C, GLU18C, GLU21C, GLU22C, GLU22D, GLU26C, GLU26D, GLU33C, GLU33D, GLU84D, HIS30C, HIS30D, ILE76D, LEU20C, LEU79C, LEU79D, LEU81C, LEU81D, LEU83C, LEU83D, LYS36D, LYS80D, PHE24C, PHE40D, PHE75C, PHE75D, PRO19C, TRP78C, TRP78D, TYR31C, TYR31D, TYR85D, VAL23C, VAL23D
• C-E: ALA55E, ARG27C, ARG82C, ASN72C, GLN51E, GLN53E, GLN57E, GLN73C, GLN74C, GLN77C, GLN90C, GLN90E, GLU56E, GLU94E, GLU95E, ILE76C, LEU79C, LEU81C, LYS36C, LYS58E, LYS80C, PHE54E, PHE75C, PHE91E, PRO52E, PRO97E, SER93E, THR3C, THR3E, THR71C, THR92E, TRP78C, TYR5C, VAL96E
• C-F: GLN34C, GLN34F, GLU33C, GLU37F, GLY35F, HIS30C, LYS36C, LYS36F
• D-E: ALA55E, ALA59E, ALA65E, ARG60E, ARG82D, CYS61E, GLN51E, GLN53E, GLN57E, GLN63E, GLU16D, GLU17D, GLU18D, GLU50E, GLU56E, GLU84D, LEU49E, LEU81D, LEU83D, LYS12D, LYS58E, LYS80D, PHE13D, PHE54E, PRO19D, PRO52E, PRO62E, TRP78D, TYR85D, VAL86D
• D-F: ARG25D, ARG29D, ARG29F, ARG32F, GLN34F, GLU16D, GLU21D, GLU22D, GLU26D, GLU33F, GLY35F, LYS36F, PRO19D, THR15D, TYR31F, VAL23D
• E-F: ALA101E, ALA101F, ALA104E, ALA104F, ALA2E, ALA2F, ALA47E, ALA47F, ALA65E, ALA65F, ALA66E, ALA66F, ALA67E, ALA67F, ALA9E, ALA9F, ARG25E, ARG25F, ARG27E, ARG27F, ARG29E, ARG29F, ARG32E, ARG32F, ASN98E, ASN98F, ASP39E, ASP39F, GLN28E, GLN28F, GLN51E, GLN51F, GLN63E, GLU108E, GLU108F, GLU16E, GLU16F, GLU17E, GLU18E, GLU18F, GLU21E, GLU21F, GLU22E, GLU22F, GLU26E, GLU26F, GLU37E, GLU37F, GLU45E, GLU45F, GLU50E, GLU50F, ILE38E, ILE38F, ILE68E, ILE68F, ILE69E, ILE69F, LEU100E, LEU100F, LEU103E, LEU103F, LEU107E, LEU107F, LEU14E, LEU14F, LEU20E, LEU20F, LEU42E, LEU42F, LYS11E, LYS11F, LYS12E, LYS12F, LYS58E, PHE13E, PHE13F, PHE24E, PHE24F, PHE40E, PHE40F, PHE48E, PHE91F, PRO19E, PRO19F, PRO44E, PRO44F, PRO46E, PRO46F, PRO52E, PRO64E, PRO64F, PRO97E, PRO97F, PRO99E, PRO99F, SER102E, SER102F, SER105E, SER105F, SER10E, SER10F, SER70E, SER70F, SER93E, SER93F, THR15E, THR15F, THR71E, THR71F, TRP41E, TRP41F, TYR4E, TYR4F, VAL106E, VAL106F, VAL23E, VAL23F, VAL43E, VAL43F, VAL96E, VAL96F