3HX0

ternary complex of l277a, h511a, r514 mutant pol lambda bound to a 2 nucleotide gapped dna substrate with a scrunched da

• Total interactions analyzed: 120
• Total true interactions: 5
• Strongest Interaction:
  • Chains: F-K
  • Int. Res.: 29
  • Norm. En. per Res.: -2.1839
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-F	-3.2599	8.0744	-53.1751	-48.3606	36	1	0	2190	0	13	16
A-K	0.0	-14.5381	-33.3733	-47.9114	48	1	0	1685	2	18	17
A-P	0.0	7.9318	-10.318	-2.3862	21	0	0	620	0	8	10
F-K	-3.9402	-22.7047	-36.6875	-63.3324	29	6	2	1741	2	6	12
F-P	0.0	-17.3679	-27.3019	-44.6698	46	0	0	1470	2	18	16

Interface residues

• A-F: ALA535F, ARG438F, ARG441F, ARG478A, ARG484A, ARG485A, ARG487A, ARG549F, ARG561F, ASP382A, ASP436F, GLU258A, GLU385A, GLU390A, GLU391A, GLU394A, GLY481A, GLY483A, GLY548F, LEU254A, LEU479A, LEU532F, LEU551F, LEU562F, LYS523F, MET525F, PRO388A, PRO480A, PRO482A, PRO547F, PRO552F, PRO554F, SER439F, THR534F, THR553F, VAL550F
• A-K: ALA249A, ALA367K, ALA374K, ALA571A, ARG364K, ARG419A, ARG446K, ARG452K, ARG561A, ARG568A, ASP362K, ASP449K, ASP460K, ASP558A, GLN366K, GLN372K, GLN453K, GLN464K, GLU556A, GLU569A, GLU572A, HIS252A, HIS290A, ILE363K, ILE375K, LEU369K, LEU377K, LEU503A, LYS248A, LYS291A, LYS557A, PHE289A, PHE357K, PHE499A, PRO292A, PRO554A, PRO570A, SER246A, SER365K, SER368K, SER445K, SER450K, SER463K, THR250A, THR370K, THR371K, THR555A, TYR567A
• A-P: ARG358A, ARG358P, ASP362A, ASP362P, GLN366P, GLU330P, GLU361A, GLU361P, GLY356A, GLY356P, LEU337A, LEU337P, LEU360A, LEU360P, PHE357P, SER359A, SER359P, SER381A, TYR353P, VAL334A, VAL334P
• F-K: ALA543F, ALA543K, ARG438K, ARG441K, ARG538K, ASN467F, ASN539F, ASN539K, ASP436K, GLN464F, GLN469F, GLN469K, GLU465F, GLU466F, GLY437K, GLY468F, GLY468K, GLY542F, GLY542K, HIS440K, HIS541F, HIS541K, LYS544F, LYS544K, PRO495K, THR540F, THR540K, VAL545F, VAL545K
• F-P: ALA249F, ALA367P, ALA374P, ALA571F, ARG364P, ARG419F, ARG446P, ARG452P, ARG561F, ASP449P, ASP558F, GLN355P, GLN366P, GLN372P, GLN453P, GLN464P, GLU556F, GLU569F, GLU572F, HIS252F, HIS290F, ILE363P, ILE375P, LEU369P, LEU377P, LEU411F, LYS248F, LYS291F, LYS378P, LYS557F, PHE289F, PHE357P, PHE499F, PRO292F, PRO554F, PRO570F, SER365P, SER368P, SER445P, SER450P, SER463P, THR250F, THR370P, THR371P, THR555F, TYR567F