3HVR

crystal structure of t. thermophilus argonaute complexed with dna guide strand and 19-nt rna target strand with two mg2+ at the cleavage site

• Total interactions analyzed: 15
• Total true interactions: 1
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 237
  • Norm. En. per Res.: -3.889
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-95.2578	-324.2292	-502.203	-921.69	237	37	11	20944	29	144	122

Interface residues

• A-B: ALA228A, ALA228B, ALA242A, ALA242B, ALA390A, ALA390B, ALA394A, ALA394B, ALA423A, ALA423B, ALA508A, ALA508B, ALA510A, ALA510B, ALA529A, ALA529B, ALA560A, ALA560B, ARG232A, ARG392A, ARG392B, ARG396A, ARG396B, ARG39A, ARG39B, ARG420A, ARG420B, ARG427A, ARG427B, ARG486A, ARG486B, ARG531A, ARG531B, ARG532A, ARG532B, ARG563A, ARG563B, ARG672A, ARG672B, ARG679A, ARG679B, ASN195A, ASN195B, ASN419A, ASN419B, ASP225A, ASP225B, ASP34A, ASP34B, ASP521A, ASP521B, ASP62A, ASP62B, ASP678A, ASP678B, GLN387A, GLN387B, GLN509A, GLN509B, GLN516A, GLN516B, GLN84A, GLN84B, GLU393A, GLU393B, GLU400A, GLU400B, GLU40A, GLU40B, GLU41B, GLU428A, GLU428B, GLU483A, GLU483B, GLU507A, GLU507B, GLU517A, GLU517B, GLU524A, GLU524B, GLU525A, GLU525B, GLU564A, GLU564B, GLU676A, GLU676B, GLU680A, GLU680B, GLY231A, GLY231B, GLY388A, GLY388B, GLY38A, GLY38B, GLY488A, GLY488B, GLY489A, GLY489B, GLY511A, GLY511B, GLY565A, GLY565B, GLY667A, GLY667B, GLY670A, GLY670B, GLY83A, GLY83B, HIS227A, HIS227B, HIS256A, HIS256B, HIS673A, HIS673B, ILE254A, ILE254B, ILE514A, ILE514B, ILE566A, ILE566B, ILE671A, ILE671B, LEU217A, LEU217B, LEU221A, LEU223A, LEU223B, LEU257B, LEU260A, LEU260B, LEU33A, LEU33B, LEU389A, LEU389B, LEU395A, LEU395B, LEU424A, LEU424B, LEU46A, LEU46B, LEU505A, LEU505B, LEU522A, LEU522B, LEU523A, LEU523B, LEU527A, LEU527B, LEU537A, LEU537B, LEU556A, LEU556B, LEU561A, LEU561B, LEU669A, LEU669B, LEU674A, LEU674B, LYS230A, LYS230B, LYS397A, LYS397B, LYS675A, LYS675B, LYS681A, MET82A, MET82B, PHE391A, PHE391B, PHE485A, PHE485B, PHE487A, PHE487B, PHE683A, PHE683B, PRO216A, PRO218A, PRO218B, PRO253A, PRO253B, PRO255A, PRO255B, PRO35A, PRO35B, PRO36A, PRO36B, PRO37A, PRO37B, PRO506A, PRO506B, PRO515A, PRO515B, PRO538A, PRO538B, SER229A, SER229B, SER386A, SER386B, SER484A, SER484B, THR504A, THR504B, THR526A, THR526B, THR85A, THR85B, TRP202A, TRP202B, TRP243A, TRP243B, TRP503A, TRP503B, TRP520A, TRP520B, TRP528A, TRP528B, TYR197A, TYR197B, TYR226A, TYR226B, TYR43A, TYR43B, TYR86B, VAL244A, VAL244B, VAL31B, VAL32B, VAL42A, VAL42B, VAL518A, VAL518B, VAL519A, VAL519B, VAL666A, VAL666B, VAL677A, VAL677B