3HUY
structure of ef-p bound to the 70s ribosome; this file contains the 30s subunit, mrna, p-site trna and ef-p for molecule ii.
Total interactions analyzed 276
Total true interactions 27
Strongest Interaction Chains F-R
Int. Res. 86
Norm. En. per Res. -4.3466
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0042 -0.0042 4 0 0 5 0 1 2
B-E 0.0 0.0 -0.0901 -0.0901 8 0 0 45 0 0 2
B-H -6.8033 -42.5426 -91.9515 -141.2974 33 9 0 3326 2 17 19
C-D 0.0 0.0 -4.8154 -4.8154 6 6 0 239 0 0 6
C-E 0.0 -15.8981 -10.6959 -26.594 10 1 0 632 0 4 5
C-J 0.0 7.5232 -54.0891 -46.5659 53 6 2 3194 0 14 26
C-N -20.0558 12.5906 -242.34 -249.8051 78 18 4 9514 0 19 38
D-E -3.7784 -35.1631 -78.3183 -117.2598 47 11 0 3440 4 9 11
E-H -29.9674 -37.2126 -124.171 -191.351 60 17 2 6297 5 39 44
F-O 0.0 0.0 -3.5555 -3.5555 5 1 0 227 0 4 3
F-R -72.417 -34.203 -267.19 -373.81 86 46 8 10804 2 15 22
G-I -4.3677 1.8609 -47.1994 -49.7062 40 6 3 2414 0 5 9
G-K 0.0 0.0 -57.3881 -57.3881 27 5 4 2510 0 2 6
G-U 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 1 0
G-V 0.0 0.0 -10.433 -10.433 22 1 0 783 0 2 4
H-L 0.0 0.0 -13.2392 -13.2392 10 1 0 508 0 0 1
H-Q 0.0 3.4522 -29.556 -26.1038 16 3 0 1331 0 2 7
I-J 0.0 -2.2463 -26.3012 -28.5475 19 10 0 1401 0 9 16
I-N 0.0 0.0 -16.533 -16.533 6 0 0 496 0 0 0
J-N -8.5134 -41.0981 -178.926 -228.5375 57 31 6 8289 4 17 38
K-R -29.0178 -15.8487 -59.3384 -104.2048 28 8 2 2656 2 13 19
K-V 0.0 0.0 -0.0128 -0.0128 5 0 0 13 0 0 0
L-Q 0.0 0.0 -51.9359 -51.9359 22 9 4 2547 0 0 8
M-S 0.0 -5.3864 -75.7345 -81.1209 44 11 3 3570 0 9 15
M-U 0.0 0.0 -3.2948 -3.2948 12 0 0 348 0 3 9
N-S 0.0 0.0 -0.0129 -0.0129 4 0 0 12 0 1 1
O-Q 0.0 -1.0769 -1.2374 -2.3143 13 0 0 140 0 7 6