3HUW
structure of ef-p bound to the 70s ribosome; this file contains the 30s subunit, mrna, p-site trna and ef-p for molecule i.
Total interactions analyzed 276
Total true interactions 27
Strongest Interaction Chains F-R
Int. Res. 86
Norm. En. per Res. -4.1573
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.001 -0.001 2 0 0 3 0 0 2
B-E 0.0 0.0 -0.0812 -0.0812 5 0 0 26 0 0 2
B-H -12.0096 -38.9808 -58.0388 -109.0292 34 18 0 2845 1 17 17
C-D 0.0 0.0 -4.8911 -4.8911 7 0 0 254 0 0 8
C-E 0.0 -14.1785 -10.2151 -24.3936 15 0 0 676 0 4 5
C-J 0.0 9.3565 -72.6722 -63.3157 58 5 2 3301 0 17 27
C-N -15.8057 11.1153 -232.321 -237.0113 78 16 3 9232 0 20 39
D-E 0.0 -6.2028 -65.3758 -71.5786 48 4 0 2852 2 9 9
E-H -6.9067 -32.4858 -111.547 -150.9395 60 18 2 5832 2 39 42
F-O 0.0 0.0 -2.2725 -2.2725 4 0 0 159 0 3 3
F-R -59.6718 -27.1916 -270.663 -357.5264 86 42 8 10708 2 13 22
G-I 0.0 1.874 -40.7199 -38.8459 41 14 5 2419 0 7 9
G-K -3.3213 0.0 -65.9074 -69.2287 30 9 4 2708 0 2 6
G-U 0.0 0.0 -0.0549 -0.0549 2 0 0 21 0 2 0
G-V 0.0 0.0 -11.9242 -11.9242 20 0 0 711 0 1 4
H-L 0.0 0.0 -11.1523 -11.1523 10 0 0 473 0 0 1
H-Q 0.0 4.1815 -23.619 -19.4375 15 1 0 1167 0 2 8
I-J 0.0 -1.7207 -25.4599 -27.1806 18 6 0 1225 0 8 15
I-N -5.9707 0.0 -16.6587 -22.6294 8 1 0 536 0 0 0
J-N -11.2035 -22.7482 -186.104 -220.0557 55 29 6 8568 4 16 37
K-R -23.6048 -15.3419 -35.7356 -74.6823 33 17 2 2733 0 14 19
K-V 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 0 0
L-Q 0.0 0.0 -52.7036 -52.7036 21 1 4 2242 0 0 8
M-S -2.8163 1.8218 -57.7436 -58.738 37 2 3 2818 0 9 16
M-U 0.0 0.0 -5.8926 -5.8926 14 0 0 501 0 4 11
N-S 0.0 0.0 -0.0089 -0.0089 3 0 0 8 0 0 0
O-Q 0.0 -1.3577 -2.0822 -3.44 10 0 0 168 0 9 6