3HOZ
complete rna polymerase ii elongation complex iv with a t-u mismatch and a frayed rna 3'-guanine
Total interactions analyzed 105
Total true interactions 29
Strongest Interaction Chains C-L
Int. Res. 57
Norm. En. per Res. -5.1833
Hub Node B(10)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -518.4242 -306.9802 -2550.33 -3375.7345 770 292 69 109724 27 259 234
A-C -3.1843 4.1316 -68.0947 -67.1474 50 9 0 3035 0 16 17
A-D -6.8634 -23.2952 -34.293 -64.4517 35 7 1 2269 2 13 5
A-E -100.1517 -94.4625 -544.596 -739.2102 197 58 15 23334 9 81 63
A-F -84.9014 -49.7473 -493.311 -627.9597 177 49 14 21924 7 62 56
A-G -17.7667 -59.7571 -131.12 -208.6438 63 8 5 5579 2 20 16
A-H -84.6713 -26.9511 -384.545 -496.1674 139 52 13 17280 3 37 34
A-I -84.4714 -27.3557 -424.447 -536.2741 144 43 11 17406 6 56 49
A-K -34.3429 -27.8161 -255.903 -318.062 91 21 8 10023 3 23 17
B-C -72.1063 -116.5272 -430.801 -619.4345 171 61 5 18030 9 56 60
B-D 0.0 -12.8842 -59.8551 -72.7393 39 1 1 2654 0 17 18
B-E 0.0 0.0 -15.4859 -15.4859 6 3 0 466 0 2 1
B-F 0.0 -3.0728 -10.8397 -13.9125 25 0 0 598 0 6 7
B-G -6.52 -2.8383 -7.0086 -16.3668 23 1 0 662 0 7 4
B-H 0.0 0.0 -0.4634 -0.4634 2 0 0 47 0 0 0
B-I -31.8647 -86.8918 -255.282 -374.0385 134 36 3 13083 5 50 49
B-J -21.3165 -35.6584 -435.365 -492.3399 137 39 7 18474 5 36 36
B-K -8.5202 -10.5617 -86.9843 -106.0662 56 7 0 3423 2 15 17
B-L -50.4099 -82.4814 -204.979 -337.8703 115 33 8 11374 12 48 45
C-H 0.0 -1.7254 -28.8114 -30.5368 25 1 1 1384 0 8 6
C-J -51.5904 -23.9694 -233.541 -309.1009 108 37 9 12503 7 37 25
C-K -39.8155 -27.7264 -505.326 -572.8679 155 57 17 23709 7 47 47
C-L -48.014 -81.9029 -165.53 -295.4469 57 14 9 6034 10 23 16
D-G -59.9913 -27.9575 -608.161 -696.1098 202 54 21 25959 12 54 48
E-F -10.8719 -20.8163 -31.9061 -63.5944 23 2 0 1312 0 6 4
F-G -9.6793 -8.9801 -105.69 -124.3494 55 14 1 4899 1 11 12
H-K 0.0 0.0 -28.0613 -28.0613 26 1 0 1552 0 5 5
J-L 0.0 0.0 -8.8104 -8.8104 10 0 0 483 0 0 1
K-L 0.0 8.0228 -0.9612 7.0616 5 0 0 156 0 3 2