3HOY
complete rna polymerase ii elongation complex vi
Total interactions analyzed 105
Total true interactions 29
Strongest Interaction Chains A-B
Int. Res. 762
Norm. En. per Res. -4.6138
Hub Node B(10)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -513.7724 -348.2354 -2653.68 -3515.6877 762 239 64 110677 25 265 233
A-C -28.722 6.7843 -72.9229 -94.8606 52 5 0 3055 0 18 18
A-D 0.0 0.0 -7.7483 -7.7483 20 0 1 562 0 13 6
A-E -86.9823 -87.8778 -540.561 -715.4212 200 36 14 23385 8 78 65
A-F -83.0966 -50.0198 -505.261 -638.3774 173 39 14 21221 3 65 55
A-G -26.526 -83.5739 -129.42 -239.5199 62 18 5 5843 4 22 15
A-H -72.8534 -19.0373 -392.596 -484.4867 139 65 13 17724 2 35 36
A-I -118.4126 -34.0548 -429.586 -582.0534 139 60 11 17220 7 58 47
A-K -44.7376 -38.021 -259.323 -342.0816 88 13 8 9974 3 22 20
B-C -74.5498 -121.3757 -422.121 -618.0465 169 53 4 18084 9 55 62
B-D 0.0 0.0 -18.68 -18.68 29 2 1 1125 0 17 18
B-E 0.0 0.0 -14.578 -14.578 9 2 0 406 0 2 1
B-F 0.0 3.8386 -13.5088 -9.6702 25 0 0 681 0 6 8
B-G -9.7731 -4.3107 -5.8921 -19.9759 26 1 0 730 0 7 4
B-H 0.0 0.0 -1.296 -1.296 2 0 0 58 0 0 0
B-I -24.2398 -67.7599 -280.273 -372.2727 138 30 3 12862 3 50 47
B-J -43.9188 -33.855 -414.012 -491.7858 137 35 7 18678 3 34 36
B-K -7.1285 -18.4354 -90.0353 -115.5992 57 3 0 3406 3 16 20
B-L -73.6131 -89.7226 -222.449 -385.7848 113 25 9 11295 12 48 43
C-H -5.9172 -6.7648 -37.2012 -49.8832 23 2 1 1561 1 8 7
C-J -48.3575 -70.77 -209.922 -329.0495 109 36 10 12248 7 38 25
C-K -53.9985 -29.7525 -453.12 -536.8711 152 65 17 23076 7 47 47
C-L -37.5647 -47.7138 -149.96 -235.2385 59 14 9 5873 7 23 16
D-G -53.5888 -14.6003 -558.213 -626.402 195 49 26 24154 10 54 49
E-F -11.7562 -23.7497 -27.9071 -63.413 23 1 0 1184 0 6 4
F-G -5.932 -12.0997 -105.045 -123.0766 53 11 1 4730 1 9 10
H-K 0.0 0.0 -38.5225 -38.5225 27 9 0 1967 0 5 5
J-L 0.0 0.0 -12.2241 -12.2241 11 1 0 564 0 0 1
K-L 0.0 8.0642 -0.7028 7.3614 5 0 0 141 0 3 2