3HOV
complete rna polymerase ii elongation complex ii
Total interactions analyzed 105
Total true interactions 29
Strongest Interaction Chains A-B
Int. Res. 778
Norm. En. per Res. -4.4825
Hub Node B(10)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -520.6185 -353.8173 -2612.92 -3487.3558 778 238 68 110425 26 264 235
A-C -13.4319 6.4638 -69.8768 -76.8449 49 5 0 2920 0 16 17
A-D -6.0358 -20.802 -36.9347 -63.7724 37 4 1 2266 1 12 5
A-E -86.1824 -87.8471 -557.666 -731.6955 196 49 15 23576 8 79 65
A-F -78.0965 -40.5622 -514.275 -632.9337 178 32 15 21468 2 66 56
A-G -19.3251 -61.5251 -121.97 -202.8202 62 11 5 5541 4 20 15
A-H -78.0871 -11.7511 -360.626 -450.4642 138 62 13 17391 2 35 33
A-I -94.6774 -22.4632 -432.749 -549.8896 141 44 11 17379 6 53 46
A-K -33.9507 -32.2804 -258.624 -324.8551 94 23 8 10016 3 23 18
B-C -69.0239 -118.4343 -436.354 -623.8123 170 51 4 18064 9 57 59
B-D 0.0 -12.4085 -65.271 -77.6795 39 2 1 2790 0 16 17
B-E 0.0 0.0 -13.6331 -13.6331 8 2 0 485 0 2 1
B-F 0.0 -2.4333 -11.4781 -13.9114 23 0 0 587 0 6 7
B-G -4.3952 -2.5786 -7.4118 -14.3855 22 2 0 689 0 7 4
B-H 0.0 0.0 -0.3375 -0.3375 2 0 0 44 0 0 0
B-I -30.6474 -88.9071 -297.83 -417.3845 132 37 2 13940 6 52 51
B-J -23.5975 -37.5508 -425.283 -486.4314 137 40 7 18517 5 35 37
B-K -16.7779 -16.1768 -89.9427 -122.8975 56 7 0 3481 3 15 19
B-L -43.0774 -79.1321 -233.482 -355.6915 117 37 7 11326 13 46 46
C-H 0.0 -2.1271 -31.4223 -33.5494 25 0 1 1416 0 8 7
C-J -49.5024 -27.7465 -237.675 -314.9239 107 32 11 12404 9 38 26
C-K -35.2236 -28.3849 -515.159 -578.7676 150 49 18 23599 6 48 47
C-L -38.5592 -69.3673 -157.704 -265.6305 60 15 9 6099 7 23 16
D-G -81.0896 -27.2569 -622.927 -731.2735 202 45 22 25716 11 54 48
E-F -4.7846 -20.1738 -25.2845 -50.2429 22 5 0 1246 0 6 4
F-G -3.9794 -11.8783 -100.063 -115.9207 54 16 1 4886 1 10 11
H-K 0.0 0.0 -36.8702 -36.8702 26 2 0 1849 0 5 5
J-L 0.0 0.0 -10.3714 -10.3714 10 0 0 478 0 1 1
K-L 0.0 8.6842 -0.7583 7.926 5 0 0 136 0 2 2