3HJW

structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate rna

• Total interactions analyzed: 10
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 113
  • Norm. En. per Res.: -6.4873
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-112.8025	-214.8495	-405.412	-733.064	113	22	9	15299	12	67	49
A-C	0.0	-8.1607	-3.8624	-12.0231	7	0	0	177	0	5	7
B-C	-11.8508	-56.8581	-145.379	-214.0878	55	4	2	5694	1	51	31

Interface residues

• A-B: ALA115A, ALA30B, ALA67A, ARG13B, ARG169A, ARG174A, ARG204A, ARG205A, ARG34B, ARG45B, ARG46B, ARG47B, ARG4B, ARG50B, ARG6B, ASP170A, ASP214A, ASP222A, ASP225A, ASP233A, ASP39B, ASP55A, CYS11B, CYS20B, GLU112A, GLU162A, GLU165A, GLU167A, GLU18B, GLU202A, GLU213A, GLU232A, GLU236A, GLU237A, GLU38B, GLU43B, GLU51B, GLU64A, GLY12B, GLY168A, GLY234A, GLY42B, GLY54B, GLY59A, GLY90A, HIS118A, HIS221A, HIS31B, ILE166A, ILE218A, ILE235A, ILE55B, ILE5B, ILE69A, ILE72A, LEU116A, LEU164A, LEU16B, LEU172A, LEU203A, LEU217A, LEU220A, LEU223A, LEU53B, LEU54A, LYS17B, LYS49B, LYS56A, LYS71A, LYS7B, LYS87A, MET117A, MET200A, PHE173A, PHE229A, PHE35B, PHE3B, PRO21B, PRO32B, PRO33B, PRO37B, PRO40B, PRO57A, PRO58A, PRO60A, PRO86A, SER201A, SER36B, SER89A, THR15B, THR206A, THR219A, THR27B, TRP230A, TRP48B, TRP68A, TYR113A, TYR14B, TYR226A, TYR227A, TYR228A, TYR238A, VAL114A, VAL163A, VAL171A, VAL19B, VAL224A, VAL22B, VAL29B, VAL52B, VAL65A, VAL88A, VAL91A
• A-C: ASP222A, ASP225A, GLU62C, HIS221A, ILE63C, PRO60C, THR219A
• B-C: ALA30B, ALA65C, ARG34B, ARG45B, ARG46B, ARG47B, ARG6B, ASN38C, ASP57C, ASP59C, CYS71C, GLU18B, GLU43B, GLU45C, GLU51B, GLU61C, GLU62C, GLU72C, GLU73C, GLY42B, HIS31B, HIS66C, ILE63C, LEU67C, LEU70C, LYS28B, LYS42C, LYS49B, LYS74C, LYS7B, LYS84C, LYS9C, PHE35B, PHE3B, PRO32B, PRO33B, PRO40B, PRO5C, PRO60C, PRO68C, PRO69C, SER6C, THR27B, THR37C, THR41C, TRP48B, TYR41B, TYR44B, TYR7C, VAL29B, VAL44C, VAL52B, VAL58C, VAL64C, VAL8C