3HAY

crystal structure of a substrate-bound full h/aca rnp from pyrococcus furiosus

• Total interactions analyzed: 15
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 104
  • Norm. En. per Res.: -4.982
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-6.1727	-25.4822	-143.422	-175.0769	67	1	9	6579	4	12	16
A-C	-47.0961	-163.7658	-307.264	-518.1259	104	13	6	12745	9	63	44
A-D	0.0	7.5202	-5.332	2.1883	7	0	0	257	0	5	7
C-D	0.0	-57.7401	-133.053	-190.7931	58	4	2	5924	4	54	31

Interface residues

• A-B: ALA11B, ALA193A, ALA198A, ALA54B, ARG142A, ARG156A, ARG19B, ASN27B, ASP43B, GLN130A, GLN13B, GLN141A, GLU134A, GLU136A, GLU138A, GLY121A, GLY137A, GLY14B, GLY191A, GLY195A, GLY197A, GLY46B, HIS120A, HIS188A, HIS189A, HIS199A, HIS9B, ILE139A, ILE140A, ILE17B, ILE190A, ILE55B, LEU153A, LEU16B, LEU186A, LEU192A, LEU194A, LEU26B, LEU8B, LYS127A, LYS12B, LYS133A, LYS157A, LYS42B, LYS49B, MET50B, PHE135A, PHE15B, PHE45B, PRO24B, PRO47B, PRO51B, SER185A, SER25B, THR155A, TRP22B, TYR10B, TYR52B, VAL123A, VAL131A, VAL158A, VAL196A, VAL23B, VAL41B, VAL44B, VAL48B, VAL53B
• A-C: ALA115A, ALA30C, ALA67A, ARG13C, ARG169A, ARG174A, ARG204A, ARG205A, ARG34C, ARG45C, ARG46C, ARG47C, ARG4C, ARG50C, ARG6C, ASP170A, ASP214A, ASP222A, ASP225A, ASP233A, ASP39C, ASP55A, GLU162A, GLU165A, GLU167A, GLU202A, GLU213A, GLU232A, GLU38C, GLU43C, GLU51C, GLU64A, GLY12C, GLY168A, GLY42C, GLY54C, GLY59A, GLY90A, HIS118A, HIS221A, HIS31C, ILE166A, ILE218A, ILE235A, ILE55C, ILE5C, ILE69A, ILE72A, LEU116A, LEU164A, LEU16C, LEU172A, LEU203A, LEU217A, LEU220A, LEU223A, LEU53C, LEU54A, LYS17C, LYS241A, LYS49C, LYS56A, LYS71A, LYS7C, LYS87A, MET117A, MET200A, PHE173A, PHE229A, PHE35C, PHE3C, PRO21C, PRO32C, PRO33C, PRO37C, PRO40C, PRO57A, PRO58A, PRO60A, PRO86A, SER201A, SER36C, SER89A, THR15C, THR206A, THR219A, TRP48C, TRP68A, TYR14C, TYR226A, TYR227A, TYR228A, TYR238A, TYR41C, VAL114A, VAL163A, VAL171A, VAL224A, VAL22C, VAL29C, VAL52C, VAL65A, VAL88A, VAL91A
• A-D: ASP222A, ASP225A, GLU62D, HIS221A, ILE63D, PRO60D, THR219A
• C-D: ALA30C, ALA65D, ARG34C, ARG45C, ARG46C, ARG46D, ARG47C, ARG50C, ARG6C, ASN38D, ASP57D, ASP59D, CYS71D, GLU18C, GLU43C, GLU45D, GLU51C, GLU61D, GLU62D, GLU72D, GLU73D, GLY42C, HIS31C, HIS66D, ILE63D, LEU67D, LEU70D, LYS26C, LYS28C, LYS42D, LYS49C, LYS4D, LYS74D, LYS84D, LYS9D, PHE35C, PHE3C, PRO32C, PRO33C, PRO40C, PRO5D, PRO60D, PRO68D, PRO69D, SER6D, THR27C, THR37D, THR41D, TRP48C, TYR41C, TYR44C, TYR7D, VAL29C, VAL44D, VAL52C, VAL58D, VAL64D, VAL8D