3H0R
structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
Total interactions analyzed 276
Total true interactions 47
Strongest Interaction Chains E-F
Int. Res. 139
Norm. En. per Res. -5.8478
Hub Node A(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -60.3507 -17.0765 -379.073 -456.5002 134 18 7 15579 2 25 31
A-C -72.3726 -22.7236 -679.934 -775.0303 211 31 20 28318 4 84 65
A-E -13.3064 -21.3648 -102.24 -136.9112 100 5 1 5302 4 57 52
A-G 0.0 0.0 -0.1174 -0.1174 6 0 0 43 0 7 6
B-C -131.018 -92.1424 -535.229 -758.3894 140 56 11 20260 9 58 52
B-G 0.0 0.0 -3.6288 -3.6288 10 0 0 277 0 9 10
B-S 0.0 3.1027 -2.1289 0.9738 9 0 0 214 0 9 8
C-E 0.0 0.0 -1.3822 -1.3822 7 0 0 156 0 8 6
C-G -6.4913 -7.2885 -35.6737 -49.4535 30 2 0 1673 2 15 16
D-E -44.6275 -17.0839 -379.35 -441.0614 137 14 7 15563 2 21 31
D-F -94.3004 -28.1813 -686.874 -809.3557 208 26 22 28394 5 83 66
D-H 0.0 -29.249 -44.9989 -74.2479 59 7 0 3026 4 48 46
E-F -172.5406 -99.4466 -540.855 -812.8422 139 51 10 20339 10 58 51
E-G -20.0333 -46.2206 -53.4748 -119.7287 60 7 0 3227 6 46 44
E-I -7.6547 -47.3821 -42.0669 -97.1037 38 2 0 2115 1 28 19
F-H -10.1743 -42.7715 -43.6662 -96.612 38 5 0 2142 1 28 20
F-X 0.0 0.2402 3 ARG4X, ASP3F, GLU5X
G-H -68.5152 -15.9158 -389.677 -474.108 136 23 7 15685 2 21 31
G-I -89.9648 -36.5632 -680.115 -806.643 209 24 21 28533 6 85 65
G-K -22.8845 -28.0093 -84.193 -135.0868 94 5 0 4808 4 61 49
H-I -149.4214 -84.7368 -550.916 -785.0742 141 51 12 20780 6 59 53
H-M 0.0 0.0 -0.012 -0.012 5 0 0 10 0 2 3
I-K 0.0 0.0 -0.1202 -0.1202 5 0 0 46 0 4 4
I-T 0.0 35.0991 4 ARG4I, ASP3I, GLU408T, GLU5I
J-K -58.4499 -12.3117 -392.318 -463.0795 139 19 7 15875 2 21 32
J-L -98.5511 -9.5415 -664.27 -772.3626 207 24 21 27995 3 85 65
J-Q 0.0 -21.1262 -16.1328 -37.259 24 1 0 773 1 17 17
K-L -144.6997 -87.4942 -531.052 -763.2459 139 43 10 20202 7 57 48
K-N -9.4297 9.2815 -9.799 -9.9471 30 1 0 817 0 25 28
M-N -66.8497 -17.3518 -374.752 -458.9535 133 19 7 15570 2 21 30
M-O -75.6856 -34.0641 -685.137 -794.8867 209 20 21 28595 5 85 66
N-O -162.5901 -80.5337 -534.408 -777.5318 139 48 10 20409 7 61 51
N-P -22.169 -41.9106 -110.85 -174.9296 106 8 0 5585 5 60 54
N-R 0.0 0.0 -0.6789 -0.6789 6 0 0 117 0 7 6
O-V -7.7148 -1.8193 9 ARG81O, ASP440V, ASP83O, GLU271V, GLU274V, GLU80O, LYS278V, LYS439V, LYS82O
P-Q -67.7409 -16.8372 -390.527 -475.105 132 12 7 15597 1 23 33
P-R -80.4439 -21.8113 -667.424 -769.6792 208 21 22 28125 4 86 65
P-S 0.0 0.0 -0.1203 -0.1203 7 0 0 39 0 3 5
P-U -4.3312 -15.9978 9 ARG81U, ASP440P, ASP83U, GLU271P, GLU274P, GLU80U, LYS278P, LYS439P, LYS82U
Q-R -159.0759 -95.0209 -544.051 -798.1478 138 46 10 20481 9 60 50
S-T -41.0785 -11.1459 17 ARG193S, ARG316S, ARG321S, ARG80T, ASP230S, ASP275T, ASP277T, GLU309S, GLY195S, GLY45T, GLY48T, LEU44T, LYS90T, PRO51T, PRO89T, SER231S, TYR322S
S-U -67.3275 -31.6076 38 ALA14U, ALA337S, ARG15U, ARG325S, ARG338S, ARG340S, ARG350S, ARG376S, ARG61U, ASN77U, ASP341S, ASP44U, GLN372S, GLU17U, GLU228S, GLU22U, GLU334S, GLU342S, GLU46U, GLU49U, GLU54U, GLU57U, GLU78S, GLU80U, HIS452S, HIS66U, LEU43U, LYS19U, LYS229S, LYS235S, LYS349S, LYS370S, LYS373S, LYS41U, LYS73U, PRO95S, TYR51U, VAL93S
T-U -151.5617 -92.9416 43 ARG15U, ARG56T, ARG61U, ARG71U, ARG90U, ASN54T, ASP138T, ASP269T, ASP63U, ASP83U, GLU136T, GLU268T, GLU34T, GLU56U, GLU57U, GLU59T, GLU62U, GLU64U, GLU80U, GLY137T, GLY26T, HIS135T, HIS66U, ILE52T, LEU69U, LYS12U, LYS139T, LYS20T, LYS22T, LYS282T, LYS284T, LYS55T, LYS82U, LYS9U, MET23T, PHE86U, THR140T, THR21T, THR58U, VAL142T, VAL39T, VAL53T, VAL88U
T-V -45.7699 -25.4757 25 ARG356T, ASN349T, ASP350T, ASP357T, GLU141V, GLU228T, GLU26V, GLU314T, GLU37V, GLU391T, GLU3T, GLU406V, GLU409V, GLU55V, GLU90V, LYS135V, LYS22V, LYS382T, LYS387T, LYS38V, LYS390T, LYS394T, LYS403V, LYS40V, LYS52V
V-W -57.7452 -16.5261 21 ALA361V, ARG193V, ARG316V, ARG321V, ARG80W, ASN313V, ASP230V, ASP269W, ASP275W, ASP277W, GLU309V, GLY195V, GLY45W, GLY48W, LEU44W, LYS90W, MET46W, PRO51W, PRO89W, SER231V, TYR322V
V-X -86.0795 -16.0686 36 ALA14X, ALA337V, ARG15X, ARG325V, ARG338V, ARG340V, ARG350V, ARG61X, ASN77X, ASP341V, ASP44X, GLN372V, GLU17X, GLU228V, GLU22X, GLU334V, GLU342V, GLU46X, GLU49X, GLU54X, GLU57X, GLU78V, GLU80X, HIS452V, HIS66X, LEU43X, LYS19X, LYS229V, LYS235V, LYS349V, LYS370V, LYS373V, LYS73X, THR45X, TYR51X, VAL93V
W-X -153.5401 -87.9992 39 ARG15X, ARG56W, ARG61X, ARG71X, ARG90X, ASP138W, ASP63X, ASP83X, CYS25W, GLU136W, GLU268W, GLU34W, GLU56X, GLU57X, GLU59W, GLU62X, GLU64X, GLU80X, GLY26W, HIS135W, HIS66X, ILE52W, LEU69X, LYS12X, LYS139W, LYS20W, LYS22W, LYS282W, LYS284W, LYS55W, LYS82X, PHE86X, THR140W, THR21W, THR58X, VAL142W, VAL39W, VAL53W, VAL88X