3H0L
structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
Total interactions analyzed 276
Total true interactions 46
Strongest Interaction Chains E-F
Int. Res. 139
Norm. En. per Res. -5.9499
Hub Node A(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -45.0265 -17.7297 -375.734 -438.4902 133 20 7 15646 2 21 30
A-C -74.8283 -18.9279 -680.354 -774.1102 209 24 22 28212 3 85 65
A-E -16.5415 -28.2486 -80.4062 -125.1963 88 2 0 4336 3 54 51
A-G 0.0 0.0 -0.0677 -0.0677 7 0 0 32 0 7 6
B-C -151.9326 -87.4807 -548.063 -787.4763 141 36 10 20205 9 59 50
B-G 0.0 0.0 -2.1945 -2.1945 10 0 0 221 0 9 8
B-S 0.0 2.9802 -2.6738 0.3065 9 0 0 234 0 9 8
C-E 0.0 0.0 -0.7391 -0.7391 6 0 0 124 0 6 6
C-G -12.2655 -8.2618 -30.0479 -50.5752 28 1 0 1467 1 15 16
D-E -50.2735 -8.5554 -388.015 -446.8439 134 17 7 15661 1 21 30
D-F -98.8559 -30.5138 -692.35 -821.7197 209 26 22 28478 4 85 66
D-H -8.1116 -32.9998 -53.0024 -94.1138 57 7 0 3008 5 47 46
E-F -161.4655 -108.7572 -556.817 -827.0397 139 38 11 20509 12 59 51
E-G -20.0524 -44.6559 -47.6661 -112.3745 60 7 0 3215 5 46 44
E-I -7.9984 -37.6179 -41.526 -87.1422 36 4 0 2041 2 28 19
F-H -12.5428 -39.2714 -42.4228 -94.2371 35 2 0 2077 2 28 21
G-H -68.6582 -16.2356 -384.6 -469.4938 136 21 7 15764 2 23 30
G-I -89.8227 -37.8525 -688.366 -816.0413 206 29 22 28713 6 86 66
G-K -19.8852 -33.5431 -79.4613 -132.8896 90 3 0 4403 5 59 49
H-I -165.2875 -84.4004 -546.334 -796.0219 139 37 10 20365 7 59 51
H-M 0.0 0.0 -0.0345 -0.0345 3 0 0 9 0 2 2
I-K 0.0 0.0 -0.0896 -0.0896 5 0 0 37 0 4 4
I-T 0.0 35.8329 4 ARG4I, ASP3I, GLU408T, GLU5I
J-K -58.3117 -14.5533 -380.379 -453.2441 136 17 7 15561 2 21 29
J-L -95.9309 -27.5142 -668.865 -792.31 208 19 22 28099 5 85 66
J-Q 0.0 -23.0346 -19.2095 -42.2441 24 0 0 738 1 16 15
K-L -146.7741 -90.6385 -537.327 -774.7395 138 31 10 19960 9 58 48
K-N -8.1152 12.1375 -11.7953 -7.7729 33 0 0 888 0 26 29
M-N -64.4027 -15.5514 -372.52 -452.4741 135 17 7 15611 1 22 32
M-O -92.1709 -25.1016 -684.931 -802.2035 208 26 22 28558 5 86 67
N-O -168.5914 -83.9659 -539.672 -792.2293 138 43 10 20311 7 59 52
N-P -22.4457 -41.317 -82.6067 -146.3694 95 4 0 4670 5 56 52
N-R 0.0 0.0 -0.6969 -0.6969 6 0 0 113 0 5 6
O-V -7.3294 -6.5612 9 ARG81O, ASP440V, ASP83O, GLU271V, GLU274V, GLU80O, LYS278V, LYS439V, LYS82O
P-Q -63.1756 -13.7656 -377.768 -454.7092 135 14 7 15457 1 22 29
P-R -75.3476 -24.672 -656.197 -756.2166 209 23 22 28162 4 87 66
P-S 0.0 0.0 -0.1007 -0.1007 6 0 0 40 0 6 6
P-U -10.072 -11.3345 9 ARG81U, ASP440P, ASP83U, GLU271P, GLU274P, GLU80U, LYS278P, LYS439P, LYS82U
Q-R -162.1098 -90.9393 -535.555 -788.6041 138 41 10 20236 8 59 50
S-T -52.8876 -13.4696 22 ALA361S, ARG193S, ARG316S, ARG321S, ARG80T, ASP230S, ASP269T, ASP275T, ASP277T, ASP318S, GLU309S, GLY195S, GLY45T, GLY48T, LEU44T, LYS90T, MET46T, PRO51T, PRO89T, SER231S, TYR322S, TYR92T
S-U -83.8342 -24.0874 41 ALA14U, ALA337S, ARG15U, ARG325S, ARG338S, ARG340S, ARG350S, ARG376S, ARG61U, ASN77U, ASP341S, ASP44U, GLN372S, GLN53U, GLU17U, GLU228S, GLU22U, GLU334S, GLU342S, GLU46U, GLU49U, GLU54U, GLU57U, GLU78S, GLU80U, HIS452S, HIS66U, ILE52U, LEU43U, LYS19U, LYS229S, LYS235S, LYS349S, LYS370S, LYS373S, LYS41U, LYS73U, THR232S, THR45U, TYR51U, VAL93S
T-U -163.7704 -95.5698 43 ARG15U, ARG56T, ARG61U, ARG71U, ARG90U, ASN54T, ASP138T, ASP269T, ASP63U, ASP83U, CYS25T, GLU136T, GLU268T, GLU34T, GLU56U, GLU57U, GLU59T, GLU62U, GLU64U, GLU80U, GLY137T, GLY26T, HIS135T, HIS66U, ILE52T, LEU69U, LYS12U, LYS139T, LYS20T, LYS22T, LYS282T, LYS284T, LYS55T, LYS82U, LYS9U, MET23T, PHE86U, THR140T, THR58U, VAL142T, VAL39T, VAL53T, VAL88U
T-V -21.1853 -29.7454 20 ARG356T, ASN349T, ASP357T, GLU141V, GLU228T, GLU26V, GLU37V, GLU391T, GLU3T, GLU406V, GLU409V, GLU55V, LYS135V, LYS387T, LYS38V, LYS390T, LYS394T, LYS403V, LYS40V, LYS52V
V-W -61.7254 -15.3814 22 ALA361V, ARG193V, ARG316V, ARG321V, ARG80W, ASN313V, ASP230V, ASP269W, ASP275W, ASP277W, GLU309V, GLY195V, GLY45W, GLY48W, LEU44W, LYS90W, MET46W, PRO51W, PRO89W, SER231V, TYR322V, TYR92W
V-X -86.9102 -17.5069 39 ALA14X, ALA337V, ARG15X, ARG325V, ARG338V, ARG340V, ARG350V, ARG376V, ARG61X, ASN77X, ASP341V, ASP44X, GLN372V, GLN53X, GLU17X, GLU228V, GLU22X, GLU334V, GLU342V, GLU46X, GLU49X, GLU54X, GLU57X, GLU78V, GLU80X, HIS452V, HIS66X, LEU43X, LYS19X, LYS229V, LYS235V, LYS349V, LYS370V, LYS373V, LYS73X, THR232V, THR45X, TYR51X, VAL93V
W-X -154.1947 -90.7486 41 ARG15X, ARG56W, ARG61X, ARG71X, ARG90X, ASN54W, ASP138W, ASP63X, ASP83X, CYS25W, GLU136W, GLU268W, GLU34W, GLU56X, GLU57X, GLU59W, GLU62X, GLU64X, GLU80X, GLY26W, HIS135W, HIS66X, ILE52W, LEU69X, LYS12X, LYS139W, LYS20W, LYS22W, LYS282W, LYS284W, LYS55W, LYS82X, MET23W, PHE86X, THR140W, THR21W, THR58X, VAL142W, VAL39W, VAL53W, VAL88X