3H00

structure of the c-terminal domain of a putative hiv-1 gp41 fusion intermediate

• Total interactions analyzed: 6
• Total true interactions: 2
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 73
  • Norm. En. per Res.: -3.0417
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-C	-18.4185	-9.8498	-193.779	-222.0473	73	9	11	8056	0	8	18
B-D	-2.4662	-11.9857	-181.212	-195.6639	70	4	11	7500	0	8	20

Interface residues

• A-C: ALA32A, ALA32C, ASN16A, ASN16C, ASN1A, ASN1C, ASN21A, ASN21C, ASN2A, ASN2C, ASN36A, ASN36C, ASN39A, ASN39C, ASP29A, ASP29C, GLN15A, GLN15C, GLN17A, GLN17C, GLN18A, GLN18C, GLN23A, GLN23C, GLU12A, GLU12C, GLU13A, GLU13C, GLU19A, GLU19C, GLU22A, GLU22C, GLU24A, GLU24C, GLU27A, GLU27C, HIS8A, HIS8C, ILE11A, ILE11C, ILE7A, ILE7C, LEU10A, LEU10C, LEU25A, LEU25C, LEU26A, LEU26C, LEU28A, LEU28C, LEU34A, LEU34C, LEU6A, LEU6C, LYS30A, LYS30C, SER14A, SER14C, SER33A, SER33C, SER5A, SER5C, SER9A, SER9C, THR4A, THR4C, TRP31A, TRP31C, TRP35A, TRP35C, TRP37C, TYR3A, TYR3C
• B-D: ALA32B, ALA32D, ASN16B, ASN16D, ASN1B, ASN1D, ASN21B, ASN21D, ASN2D, ASN36B, ASN36D, ASP29B, ASP29D, GLN15B, GLN15D, GLN17B, GLN17D, GLN18B, GLN18D, GLN23B, GLN23D, GLU12B, GLU12D, GLU13B, GLU13D, GLU19B, GLU19D, GLU22B, GLU22D, GLU24B, GLU24D, GLU27B, GLU27D, HIS8B, HIS8D, ILE11B, ILE11D, ILE7B, ILE7D, LEU10B, LEU10D, LEU25B, LEU25D, LEU26B, LEU26D, LEU28B, LEU28D, LEU34D, LEU6B, LEU6D, LYS20B, LYS30B, LYS30D, PHE38B, SER14B, SER14D, SER33B, SER33D, SER5B, SER5D, SER9B, SER9D, THR4B, THR4D, TRP31B, TRP31D, TRP35B, TRP35D, TYR3B, TYR3D