3GV2

x-ray structure of hexameric hiv-1 ca

• Total interactions analyzed: 15
• Total true interactions: 6
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 55
  • Norm. En. per Res.: -0.3422
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-9.6418	-9.6418	59	0	0	852	0	0	0
A-F	0.0	0.0	-17.1034	-17.1034	59	2	0	1080	0	0	0
B-C	0.0	0.0	-10.7216	-10.7216	54	0	0	843	0	0	0
C-D	0.0	0.0	-18.8207	-18.8207	55	0	0	1030	0	0	0
D-E	0.0	0.0	-15.95	-15.95	62	1	0	1054	0	0	0
E-F	0.0	0.0	-13.6524	-13.6524	53	0	0	937	0	0	0

Interface residues

• A-B: ALA14A, ALA22B, ALA42B, ALA64A, ALA65A, ARG162B, ARG167B, ARG173B, ARG18A, ARG18B, ASN53A, ASN57A, ASP163B, ASP166B, GLN13A, GLN179B, GLN4B, GLN63A, GLN67A, GLN7A, GLU212B, GLU35B, GLU45B, GLU71A, GLY60A, GLY61A, HIS12A, HIS62A, ILE141A, ILE15A, ILE37B, LEU172B, LEU211B, LEU43B, LEU6A, LEU6B, LYS140A, LYS170B, LYS182B, LYS70A, MET144A, MET215B, MET39B, MET66A, MET68A, PHE161B, PHE168B, PRO17A, PRO34B, PRO38B, THR171B, THR19B, THR210B, THR54A, THR58A, TYR169B, VAL165B, VAL36B, VAL59A
• A-F: ALA14F, ALA22A, ALA42A, ALA64F, ALA65F, ARG162A, ARG167A, ARG18A, ARG18F, ASN53F, ASN57F, ASP163A, ASP166A, ASP51F, GLN4A, GLN63F, GLN67F, GLN7F, GLU212A, GLU213A, GLU35A, GLU45A, GLU71F, GLY60F, GLY61F, HIS12F, HIS62F, ILE141F, ILE15F, ILE37A, LEU20F, LEU211A, LEU43A, LEU6A, LEU6F, LYS140F, LYS170A, MET144F, MET215A, MET39A, MET66F, MET68F, PHE161A, PHE168A, PRO17F, PRO34A, PRO38A, SER16F, THR171A, THR19A, THR210A, THR216A, THR54F, THR58F, TYR164A, TYR169A, VAL165A, VAL36A, VAL59F
• B-C: ALA14B, ALA42C, ALA64B, ALA65B, ARG162C, ARG167C, ARG173C, ASN53B, ASN57B, ASP163C, ASP166C, GLN13B, GLN4C, GLN63B, GLN67B, GLU212C, GLU35C, GLU45C, GLU71B, GLY60B, GLY61B, HIS12B, HIS62B, ILE141B, ILE15B, ILE37C, LEU172C, LEU20B, LEU211C, LEU43C, LEU6B, LEU6C, LYS140B, LYS170C, MET144B, MET215C, MET39C, MET66B, MET68B, PHE161C, PHE168C, PRO17B, PRO34C, PRO38C, THR171C, THR19C, THR210C, THR54B, THR58B, TYR164C, TYR169C, VAL165C, VAL36C, VAL59B
• C-D: ALA14C, ALA22D, ALA42D, ALA64C, ALA65C, ARG143C, ARG162D, ARG167D, ARG173D, ARG18D, ASN53C, ASN57C, ASP163D, ASP166D, GLN63C, GLN67C, GLU212D, GLU35D, GLU45D, GLU71C, GLY60C, GLY61C, HIS62C, ILE141C, ILE15C, ILE37D, LEU172D, LEU211D, LEU43D, LYS140C, LYS170D, LYS182D, LYS30D, MET144C, MET215D, MET39D, MET66C, MET68C, PHE161D, PHE168D, PRO17C, PRO34D, PRO38D, SER33D, THR171D, THR19D, THR210D, THR216D, THR54C, THR58C, TYR164D, TYR169D, VAL165D, VAL36D, VAL59C
• D-E: ALA14D, ALA22E, ALA42E, ALA64D, ALA65D, ARG162E, ARG167E, ARG18D, ARG18E, ASN53D, ASN57D, ASN5D, ASP163E, ASP166E, ASP51D, GLN13D, GLN4E, GLN63D, GLN67D, GLN7D, GLU212E, GLU213E, GLU35E, GLU45E, GLU71D, GLY60D, GLY61D, HIS12D, HIS62D, ILE141D, ILE15D, LEU172E, LEU211E, LEU43E, LEU69D, LEU6D, LEU6E, LYS140D, LYS170E, MET144D, MET215E, MET39E, MET66D, MET68D, PHE161E, PHE168E, PRO17D, PRO34E, PRO38E, SER16D, THR171E, THR19E, THR210E, THR216E, THR54D, THR58D, THR72D, TYR164E, TYR169E, VAL165E, VAL36E, VAL59D
• E-F: ALA14E, ALA22F, ALA42F, ALA64E, ALA65E, ARG143E, ARG162F, ARG167F, ARG173F, ASN53E, ASN57E, ASP163F, ASP166F, GLN63E, GLN67E, GLU212F, GLU213F, GLU35F, GLU45F, GLU71E, GLY60E, GLY61E, HIS62E, ILE141E, ILE15E, ILE37F, LEU172F, LEU211F, LEU43F, LYS140E, LYS170F, LYS30F, MET144E, MET215F, MET39F, MET66E, MET68E, PHE161F, PHE168F, PRO17E, PRO34F, PRO38F, THR171F, THR19F, THR210F, THR216F, THR54E, THR58E, TYR164F, TYR169F, VAL165F, VAL36F, VAL59E