3GTQ
backtracked rna polymerase ii complex induced by damage
Total interactions analyzed 66
Total true interactions 23
Strongest Interaction Chains A-B
Int. Res. 769
Norm. En. per Res. -4.2376
Hub Node B(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -398.6608 -272.4216 -2587.65 -3258.7324 769 236 58 108771 25 263 240
A-C -4.9679 10.6805 -90.3986 -84.686 53 5 0 3363 0 17 16
A-E -75.3485 -86.7706 -576.628 -738.747 206 53 14 24400 7 76 62
A-F -57.8607 -66.4285 -411.988 -536.2772 156 23 15 19052 2 47 43
A-H -45.4619 -8.4661 -362.249 -416.177 143 36 11 16922 1 35 33
A-I -96.3519 -55.9718 -412.485 -564.8087 144 34 8 16947 5 59 55
A-K -32.7542 -37.0178 -266.69 -336.4619 90 13 8 10458 2 22 21
B-C -73.8715 -92.9835 -468.355 -635.21 168 43 4 18181 7 58 59
B-E 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 0 1
B-F 0.0 0.0 -5.8594 -5.8594 15 0 0 361 0 4 6
B-H 0.0 0.0 -0.9643 -0.9643 2 0 0 49 0 0 0
B-I -18.2537 -62.2771 -320.729 -401.2598 131 16 2 13701 3 51 51
B-J -21.4607 -17.2938 -446.084 -484.8385 142 41 7 19187 4 32 36
B-K -4.1544 -11.4403 -72.1553 -87.75 57 6 0 3398 1 16 21
B-L -78.4679 -41.3378 -208.032 -327.8377 110 26 9 10529 5 46 45
C-H 0.0 -4.6136 -24.7612 -29.3748 24 0 2 1326 0 9 5
C-J -45.5321 -61.1702 -249.895 -356.5972 110 23 11 12412 7 42 26
C-K -53.2138 -26.4423 -458.738 -538.3941 153 38 17 22000 3 47 44
C-L -17.2391 -34.6485 -132.738 -184.6256 58 4 9 5437 3 20 15
E-F 0.0 -15.3391 -17.6215 -32.9606 22 0 0 1010 0 6 6
H-K 0.0 0.0 -28.955 -28.955 26 1 0 1703 0 6 4
J-L 0.0 0.0 -6.9963 -6.9963 10 0 0 382 0 0 1
K-L 0.0 5.9807 -0.5546 5.4261 5 0 0 134 0 3 2