3GTO
backtracked rna polymerase ii complex with 15mer rna
Total interactions analyzed 78
Total true interactions 22
Strongest Interaction Chains A-B
Int. Res. 756
Norm. En. per Res. -4.2547
Hub Node A(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
Download
Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -408.9566 -274.9575 -2532.67 -3216.5841 756 195 57 106179 21 253 237
A-C 0.0 7.6072 -80.9956 -73.3884 54 2 0 3253 0 18 17
A-E -71.4275 -73.5135 -532.777 -677.718 203 44 14 23372 9 77 58
A-F -53.2609 -52.2134 -393.465 -498.9393 152 33 17 18589 2 46 43
A-H -43.9472 -6.4764 -347.769 -398.1925 139 30 12 16483 0 34 31
A-I -97.0838 -55.9983 -404.01 -557.0921 144 34 10 16679 4 52 49
A-K -32.2757 -32.5051 -235.063 -299.8438 90 21 8 9880 1 21 21
B-C -95.6284 -105.0594 -462.352 -663.0399 165 42 4 17627 6 56 58
B-F 0.0 0.0 -6.2188 -6.2188 17 1 0 361 0 2 6
B-H 0.0 0.0 -0.3229 -0.3229 2 0 0 39 0 0 0
B-I -3.3354 -38.2986 -305.195 -346.829 134 18 2 13590 0 47 50
B-J -18.1745 -16.8404 -403.795 -438.8099 135 34 6 18020 3 33 38
B-K -20.4368 -21.4217 -38.8632 -80.7217 59 11 0 3164 2 14 20
B-L -71.0315 -57.9928 -217.419 -346.4432 109 26 6 10739 8 46 44
C-H 0.0 -3.6964 -19.4277 -23.1241 24 2 1 1243 0 8 5
C-J -40.1007 -51.1523 -227.51 -318.763 107 27 10 11690 4 41 28
C-K -42.9871 -21.9474 -449.128 -514.0625 150 32 14 21838 3 44 42
C-L -33.2627 -39.9519 -139.874 -213.0886 56 5 9 5297 6 22 16
E-F 0.0 -18.2716 -20.8337 -39.1053 22 5 0 1120 0 5 6
H-K 0.0 0.0 -21.5775 -21.5775 24 1 0 1383 0 6 5
J-L 0.0 0.0 -6.2323 -6.2323 9 0 0 324 0 0 1
K-L 0.0 5.3303 -0.8083 4.5221 5 0 0 132 0 3 2