3GTM
co-complex of backtracked rna polymerase ii with tfiis
Total interactions analyzed 91
Total true interactions 27
Strongest Interaction Chains C-L
Int. Res. 58
Norm. En. per Res. -4.6968
Hub Node B(9)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -417.3352 -300.1457 -2533.26 -3250.7409 756 178 65 108622 22 261 226
A-C -5.2131 8.0421 -66.9887 -64.1597 52 2 0 3025 0 15 17
A-E -91.4113 -81.1117 -548.877 -721.4 204 34 14 23990 7 84 68
A-F -65.5597 -37.9195 -493.286 -596.7652 179 30 16 21095 2 61 55
A-H -67.5978 -3.8774 -383.313 -454.7882 140 51 12 17723 2 37 36
A-I -96.7919 -54.1819 -395.434 -546.4078 143 24 9 16550 3 47 45
A-K -17.9219 -34.3214 -255.884 -308.1273 95 5 9 10205 1 23 21
A-S -46.7158 -7.267 -310.204 -364.1868 219 28 4 14266 1 38 32
B-C -84.0719 -89.3934 -498.882 -672.3473 166 18 6 17976 6 57 59
B-E 0.0 -2.1653 -6.3338 -8.4991 8 0 0 363 0 2 2
B-F 0.0 3.5227 -12.6275 -9.1048 24 0 0 587 0 4 6
B-H 0.0 0.0 -0.3987 -0.3987 2 0 0 42 0 0 0
B-I -25.9304 -63.4513 -225.829 -315.2107 144 19 2 11979 1 48 51
B-J -25.4781 -23.7797 -450.999 -500.2568 138 22 7 18660 2 36 35
B-K -11.5935 -22.2963 -80.3458 -114.2356 55 5 0 3369 2 15 20
B-L -61.4636 -56.1351 -228.787 -346.3857 110 13 8 10720 7 45 43
B-S -9.5567 0.0 -32.8765 -42.4332 23 4 0 1607 0 0 0
C-H 0.0 -11.647 -24.1557 -35.8026 24 0 1 1323 1 8 6
C-J -40.1715 -57.7391 -232.68 -330.5906 108 18 10 11629 6 37 28
C-K -23.5415 -36.4697 -457.591 -517.6022 150 32 16 21827 7 46 42
C-L -43.4522 -77.269 -151.695 -272.4163 58 8 9 5778 8 24 17
E-F -13.9624 -20.7793 -22.129 -56.8707 21 5 0 1385 0 5 7
E-S 0.0 0.0 -1.3844 -1.3844 11 0 0 232 0 3 4
H-K 0.0 0.0 -24.7799 -24.7799 24 2 0 1656 0 5 5
I-S 0.0 0.0 -0.0007 -0.0007 2 0 0 2 0 1 0
J-L 0.0 0.0 -7.9859 -7.9859 10 0 0 395 0 0 1
K-L 0.0 7.3796 -2.4623 4.9174 5 0 0 243 0 3 2