3GTL
backtracked rna polymerase ii complex with 13mer with g<>u mismatch
Total interactions analyzed 78
Total true interactions 23
Strongest Interaction Chains A-B
Int. Res. 750
Norm. En. per Res. -4.0786
Hub Node B(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -435.9445 -210.4526 -2412.56 -3058.9571 750 252 59 107383 17 268 235
A-C -13.1942 6.8053 -76.2751 -82.664 52 9 0 3253 0 16 17
A-E -80.3527 -71.3325 -561.678 -713.3632 203 33 14 23572 8 76 59
A-F -29.1026 -50.811 -399.287 -479.2006 156 26 14 18532 1 45 42
A-H -53.1173 -7.6803 -395.594 -456.3916 138 32 10 16838 1 36 33
A-I -111.7615 -53.2093 -393.895 -558.8658 143 28 10 16473 4 51 52
A-K -27.1501 -35.767 -210.335 -273.2521 89 24 7 9976 3 22 22
B-C -46.5271 -84.3171 -456.703 -587.5472 164 35 4 17607 5 59 58
B-E 0.0 0.0 -0.0008 -0.0008 2 0 0 2 0 0 1
B-F 0.0 0.0 -7.4342 -7.4342 16 0 0 374 0 4 6
B-H 0.0 0.0 -0.6656 -0.6656 2 0 0 54 0 0 0
B-I -7.7999 -61.413 -321.337 -390.5499 135 14 2 13911 3 46 53
B-J -31.1217 -19.6867 -378.228 -429.0365 135 34 6 18091 2 36 38
B-K -6.2318 -6.8804 -28.3128 -41.4251 57 13 0 3014 1 18 20
B-L -76.6332 -67.2012 -213.789 -357.6234 110 19 5 10817 5 43 46
C-H 0.0 -7.5564 -26.117 -33.6734 27 0 1 1323 0 8 5
C-J -31.3063 -40.0238 -243.642 -314.9721 111 35 12 11945 6 41 27
C-K -46.2035 -29.0128 -460.91 -536.1263 151 46 15 21951 2 46 43
C-L -10.4947 -40.2609 -130.148 -180.9036 60 9 9 5352 7 22 16
E-F 0.0 -17.4314 -21.4239 -38.8553 22 1 0 1095 0 5 6
H-K 0.0 -4.957 -21.7392 -26.6962 26 1 0 1405 0 5 5
J-L 0.0 0.0 -7.1327 -7.1327 9 0 0 359 0 1 1
K-L 0.0 6.4012 -0.7382 5.663 5 0 0 148 0 3 2