3GQB

crystal structure of the a3b3 complex from v-atpase

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 220
  • Norm. En. per Res.: -3.0324
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-117.3682	14.8701	-562.78	-665.2781	221	46	15	24687	5	72	60
A-C	0.0	-0.1452	-37.9848	-38.13	32	8	0	2435	0	16	19
B-C	0.0	8.8842	-3.3792	5.505	32	0	0	447	0	25	28
C-D	-121.3243	13.3308	-559.137	-667.1305	220	40	15	24488	5	71	59

Interface residues

• A-B: ALA10A, ALA123B, ALA13A, ALA242B, ALA246B, ALA24B, ALA289A, ALA28B, ALA292B, ALA298B, ALA31B, ALA333A, ALA385B, ALA387B, ALA414A, ALA55B, ALA80B, ARG104A, ARG124B, ARG125B, ARG146B, ARG258A, ARG274B, ARG280B, ARG281B, ARG297B, ARG299A, ARG321B, ARG329A, ARG335A, ARG340A, ARG360B, ARG416A, ARG417A, ARG453B, ARG81B, ARG89A, ARG93A, ARG95A, ASN120B, ASN260A, ASN290A, ASN293A, ASN363B, ASN364B, ASN388B, ASP264A, ASP26B, ASP290B, ASP327B, ASP380B, ASP390A, ASP391B, ASP54A, ASP78B, ASP85A, GLN148B, GLN310B, GLN336B, GLN381B, GLN46B, GLN7A, GLU243B, GLU248B, GLU257A, GLU261A, GLU268A, GLU275B, GLU276B, GLU296B, GLU302B, GLU332A, GLU334B, GLU336A, GLU342A, GLU343A, GLU348A, GLU393A, GLU450B, GLU49B, GLU52B, GLU53B, GLU62A, GLU92A, GLU96A, GLY116B, GLY11A, GLY147B, GLY228A, GLY231A, GLY256A, GLY259A, GLY279B, GLY285B, GLY299B, GLY303B, GLY30B, GLY330B, GLY335B, GLY349A, GLY388A, GLY389A, GLY57A, GLY61A, GLY86A, GLY99A, ILE100A, ILE102A, ILE15A, ILE277B, ILE294B, ILE332B, ILE337A, ILE454B, ILE48B, ILE6A, ILE83A, ILE94A, ILE9A, LEU112B, LEU117B, LEU119B, LEU239B, LEU266A, LEU27B, LEU287A, LEU291B, LEU328B, LEU355B, LEU358B, LEU361B, LEU451B, LEU58A, LEU75B, LEU91A, LYS126B, LYS149B, LYS17A, LYS234A, LYS25B, LYS304B, LYS452B, LYS59A, LYS8A, LYS97A, MET262A, MET287B, MET294A, MET344A, MET362B, PHE230A, PHE247B, PHE415A, PRO113B, PRO118B, PRO121B, PRO127B, PRO12A, PRO151B, PRO229A, PRO278B, PRO284B, PRO295A, PRO324B, PRO345A, PRO386A, PRO387A, PRO90A, SER255A, SER292A, SER326A, SER328A, SER339A, SER359B, SER384B, SER385A, SER51B, SER56A, THR103A, THR115B, THR240B, THR263A, THR289B, THR291A, THR293B, THR309B, THR322B, THR329B, THR333B, THR55A, THR98A, TYR101A, TYR244B, TYR286B, TYR288B, TYR295B, TYR29B, TYR331B, TYR350A, TYR383B, TYR386B, TYR54B, TYR84A, TYR8B, VAL106A, VAL122B, VAL145B, VAL14A, VAL265A, VAL267A, VAL296A, VAL300B, VAL301B, VAL308B, VAL384A, VAL47B, VAL50B, VAL56B, VAL5A, VAL60A, VAL79B
• A-C: ALA163C, ARG93A, ARG95A, ASP112A, GLU114A, GLU165A, GLU165C, GLU92A, GLU96A, GLY136C, GLY164C, GLY99A, ILE100A, ILE94A, LYS115A, LYS116A, LYS116C, LYS124C, LYS161C, LYS97A, MET122C, PRO121C, PRO125C, PRO162C, THR120C, THR98A, TRP119C, TYR101A, TYR166C, VAL108A, VAL123C, VAL160C
• B-C: ALA123B, ALA561C, ARG197C, ASN442C, ASP176B, ASP457B, GLN196C, GLU184B, GLU302B, GLU374C, GLU375C, GLU441C, GLU564C, GLY179B, GLY303B, GLY373C, GLY460B, HIS458B, ILE369C, LEU199C, LYS124C, LYS146C, LYS183B, LYS304B, LYS305B, LYS368B, LYS456B, LYS461B, LYS510C, LYS568C, MET122C, PRO560C
• C-D: ALA10C, ALA123D, ALA13C, ALA242D, ALA246D, ALA24D, ALA289C, ALA28D, ALA292D, ALA298D, ALA31D, ALA333C, ALA385D, ALA387D, ALA414C, ALA55D, ALA80D, ARG104C, ARG124D, ARG125D, ARG146D, ARG258C, ARG274D, ARG280D, ARG281D, ARG297D, ARG299C, ARG321D, ARG329C, ARG335C, ARG340C, ARG360D, ARG416C, ARG417C, ARG453D, ARG81D, ARG89C, ARG93C, ARG95C, ASN120D, ASN260C, ASN290C, ASN293C, ASN363D, ASN364D, ASN388D, ASP264C, ASP26D, ASP290D, ASP327D, ASP380D, ASP390C, ASP391D, ASP54C, ASP78D, ASP85C, GLN148D, GLN310D, GLN336D, GLN381D, GLN46D, GLN7C, GLU243D, GLU248D, GLU257C, GLU261C, GLU268C, GLU275D, GLU276D, GLU296D, GLU302D, GLU332C, GLU334D, GLU336C, GLU342C, GLU343C, GLU348C, GLU393C, GLU450D, GLU49D, GLU52D, GLU53D, GLU62C, GLU92C, GLU96C, GLY116D, GLY11C, GLY147D, GLY228C, GLY231C, GLY256C, GLY259C, GLY279D, GLY285D, GLY299D, GLY303D, GLY30D, GLY330D, GLY335D, GLY349C, GLY388C, GLY389C, GLY57C, GLY61C, GLY99C, ILE100C, ILE102C, ILE15C, ILE277D, ILE294D, ILE332D, ILE337C, ILE454D, ILE48D, ILE6C, ILE83C, ILE94C, ILE9C, LEU112D, LEU117D, LEU119D, LEU239D, LEU266C, LEU27D, LEU287C, LEU291D, LEU328D, LEU341C, LEU355D, LEU358D, LEU361D, LEU451D, LEU58C, LEU75D, LEU91C, LYS126D, LYS149D, LYS17C, LYS234C, LYS25D, LYS304D, LYS452D, LYS59C, LYS8C, LYS97C, MET262C, MET287D, MET294C, MET344C, MET362D, PHE230C, PHE247D, PHE415C, PRO113D, PRO118D, PRO121D, PRO127D, PRO12C, PRO151D, PRO229C, PRO278D, PRO284D, PRO295C, PRO324D, PRO345C, PRO386C, PRO387C, PRO90C, SER255C, SER292C, SER326C, SER328C, SER339C, SER359D, SER384D, SER385C, SER51D, SER56C, THR103C, THR115D, THR240D, THR263C, THR289D, THR291C, THR293D, THR322D, THR329D, THR333D, THR55C, THR98C, TYR101C, TYR244D, TYR286D, TYR288D, TYR295D, TYR29D, TYR331D, TYR350C, TYR383D, TYR386D, TYR54D, TYR84C, TYR8D, VAL106C, VAL122D, VAL145D, VAL14C, VAL265C, VAL267C, VAL296C, VAL300D, VAL301D, VAL308D, VAL384C, VAL47D, VAL50D, VAL56D, VAL5C, VAL60C, VAL79D