3GND
crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
Total interactions analyzed 190
Total true interactions 53
Strongest Interaction Chains E-G
Int. Res. 174
Norm. En. per Res. -3.9757
Hub Node A(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -33.6388 -45.818 -340.202 -419.6588 123 13 7 13646 4 27 29
A-E -32.4237 -38.1604 -323.301 -393.8851 123 19 7 13530 4 27 29
A-F -64.2225 -76.4093 -530.464 -671.0958 177 24 5 21137 4 30 45
A-G -43.3079 13.8637 -228.34 -257.7842 108 3 2 8670 0 18 23
A-J 0.0 0.0 -0.3277 -0.3277 2 0 0 57 0 4 2
B-C -32.9346 -43.3116 -335.251 -411.4972 123 15 8 13681 4 28 30
B-F -41.5955 14.3391 -219.153 -246.4094 106 4 2 8547 0 18 23
B-I 0.0 0.0 -0.3565 -0.3565 2 0 0 58 0 4 2
B-J -66.0551 -76.9909 -541.601 -684.6469 174 25 5 21300 4 30 45
C-D -41.6798 -46.4824 -333.888 -422.0502 122 20 7 13610 4 26 29
C-H 0.0 0.0 -0.3772 -0.3772 2 0 0 61 0 4 2
C-I -64.3152 -68.581 -545.853 -678.7492 176 24 5 21503 4 30 45
C-J -44.5337 13.4399 -231.942 -263.0358 106 5 2 8866 0 18 24
D-E -37.0836 -45.3403 -336.19 -418.6139 123 21 7 13919 3 27 29
D-G 0.0 0.0 -0.387 -0.387 2 0 0 60 0 4 2
D-H -71.8699 -72.5249 -526.714 -671.1088 176 23 5 21084 4 30 45
D-I -41.0601 12.5962 -223.777 -252.241 106 4 2 8550 0 18 24
D-L 0.0 0.0 -0.0027 -0.0027 4 0 0 4 0 5 2
E-F 0.0 0.0 -0.3341 -0.3341 2 0 0 61 0 4 2
E-G -66.0426 -61.9428 -563.794 -691.7794 174 25 5 21802 4 30 45
E-H -40.9495 16.7178 -227.584 -251.8157 104 5 2 8705 0 18 24
E-K 0.0 1.4466 -37.6501 -36.2035 43 12 0 2169 0 29 20
E-S 0.0 0.0 -0.0658 -0.0658 4 0 0 26 0 3 3
F-G -27.1368 -42.7878 -335.395 -405.3196 122 18 8 13740 4 28 29
F-J -35.0628 -42.8331 -316.181 -394.0769 120 16 7 13217 4 27 29
G-H -33.3075 -44.5403 -338.21 -416.0578 123 20 8 13861 4 28 29
G-K 0.0 0.0 -0.0007 -0.0007 2 0 0 2 0 2 1
G-T 0.0 -0.9265 -9.1959 -10.1224 18 1 1 611 0 10 13
H-I -30.1975 -42.8333 -338.671 -411.7017 123 12 7 13697 3 27 29
H-K 0.0 0.0 -0.2438 -0.2438 3 0 0 46 0 2 1
H-L 0.0 0.9776 61.0949 62.0725 55 46 0 4830 0 36 30
H-S 0.0 36.2615 -4.62 31.6415 24 0 0 381 0 18 23
I-J -34.9865 -46.4498 -336.739 -418.1753 123 17 8 13787 4 28 29
K-L -38.6444 -40.1324 -324.131 -402.9079 123 20 7 13442 4 26 29
K-O -42.8878 -47.6715 -335.269 -425.8283 121 18 7 13656 4 28 30
K-S 0.0 0.0 -0.0086 -0.0086 2 0 0 9 0 0 0
K-T 0.0 0.0 -0.164 -0.164 8 0 0 63 0 3 4
L-M -36.0255 -42.558 -328.588 -407.1714 121 15 7 13653 3 28 30
L-R 0.0 0.0 -0.001 -0.001 2 0 0 2 0 0 0
L-S 0.0 0.0 -0.0031 -0.0031 3 0 0 5 0 5 5
M-N -31.898 -41.8145 -326.175 -399.8875 123 15 7 13385 4 26 29
M-Q 0.0 0.0 -0.5164 -0.5164 4 0 0 108 0 4 2
M-R 0.0 0.0 -0.3952 -0.3952 4 0 0 75 0 1 3
N-O -30.2827 -43.3527 -342.395 -416.0304 123 20 7 13785 4 28 29
N-P 0.0 6.0381 -4.3615 1.6766 13 0 1 431 0 8 10
N-Q 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 0 2
O-P 0.0 0.0 -0.0148 -0.0148 2 0 0 13 0 0 2
O-T 0.0 0.0 -0.1931 -0.1931 5 0 0 54 0 1 1
P-Q -24.2535 -46.5478 -332.797 -403.5982 123 16 8 13671 4 27 29
P-T -30.4094 -44.0376 -327.065 -401.512 123 17 7 13471 4 27 29
Q-R -40.3205 -46.0295 -333.351 -419.7011 121 18 7 13620 4 27 29
R-S -38.6576 -46.8543 -334.746 -420.2579 122 23 7 13794 4 28 29
S-T -33.049 -48.203 -340.163 -421.415 122 16 8 13707 4 28 30