3G6E
co-crystal structure of homoharringtonine bound to the large ribosomal subunit
Total interactions analyzed 465
Total true interactions 27
Strongest Interaction Chains A-Z
Int. Res. 114
Norm. En. per Res. -3.9288
Hub Node C(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M 0.0 0.0 -0.41 -0.41 4 0 0 73 0 0 3
A-Z -103.2482 -28.0467 -316.59 -447.8849 114 14 8 12606 2 25 23
B-J -17.0252 -23.3807 -49.8088 -90.2147 34 1 0 1987 1 3 0
B-K -10.387 9.912 -52.7601 -53.2351 39 2 0 2626 0 11 20
B-U -14.4551 7.6489 -44.8603 -51.6665 23 1 0 1368 0 5 6
C-L 0.0 0.0 -0.0038 -0.0038 2 0 0 5 0 0 3
C-O 0.0 4.3597 -41.6078 -37.2482 21 2 0 1596 0 8 6
C-T 0.0 0.0 -13.1421 -13.1421 15 0 0 773 0 3 10
C-Y 0.0 0.0 -0.013 -0.013 2 0 0 9 0 1 2
C-1 0.0 -10.9832 -40.9736 -51.9568 16 1 0 1366 1 6 6
D-N -16.4477 -0.9884 -47.7116 -65.1477 27 8 1 2229 0 13 20
E-J -12.3056 8.8761 -65.8131 -69.2426 25 2 1 2379 0 7 7
F-M -36.883 -6.1571 -186.372 -229.4122 75 8 3 7881 4 22 25
H-Q 0.0 0.0 -0.0995 -0.0995 3 0 0 24 0 0 0
K-U -51.4699 -17.5389 -132.743 -201.7518 54 5 3 5677 1 17 20
L-M 0.0 0.0 -0.0183 -0.0183 2 0 0 14 0 0 1
L-O 0.0 0.0 -15.679 -15.679 25 0 0 1043 0 5 6
L-Y 0.0 0.0 -12.4836 -12.4836 14 1 0 420 0 0 12
L-3 0.0 0.0 -4.5653 -4.5653 5 0 0 190 0 0 2
M-3 0.0 -1.283 -36.7732 -38.0562 20 1 0 1682 0 4 2
N-Q -7.4297 6.4829 -98.583 -99.5298 55 4 3 4913 0 10 18
R-X 0.0 0.0 -0.0829 -0.0829 3 0 0 6 0 0 8
R-2 0.0 0.0 -0.1263 -0.1263 4 0 0 41 0 0 1
S-V -7.7817 -8.4275 -56.4926 -72.7018 38 1 4 2849 1 11 13
S-2 -24.0884 -3.266 -49.9281 -77.2826 26 2 0 2305 1 19 11
T-2 0.0 0.0 -0.0292 -0.0292 3 0 0 7 0 2 2
1-2 -4.7033 -8.0958 -46.362 -59.1611 24 3 0 1740 1 19 16