3FIH

ternary complex-bound e.coli 70s ribosome. this entry consists of the 30s subunit, trnas and the ternary complex.

• Total interactions analyzed: 325
• Total true interactions: 24
• Strongest Interaction:
  • Chains: J-N
  • Int. Res.: 51
  • Norm. En. per Res.: -5.1935
• Hub Node: B(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
J-N	-51.4265	-14.8462	-198.596	-264.8687	51	4	4	7743	1	16	25
J-C	0.0	-0.5021	-65.5776	-66.0797	48	0	3	2706	0	7	6
J-I	0.0	0.0	-27.1575	-27.1575	20	4	0	1369	0	10	13
K-R	-7.1382	0.0	-24.0255	-31.1637	22	5	0	1178	0	4	10
K-U	-12.1432	20.3992	-117.433	-109.177	58	1	0	5507	1	20	28
K-G	0.0	0.9175	-61.7646	-60.8471	26	0	2	2109	0	4	6
L-Q	0.0	0.0	-54.5983	-54.5983	21	2	3	2211	0	0	7
L-H	0.0	0.0	-2.0869	-2.0869	8	0	1	252	0	0	0
M-S	-13.268	-10.7314	-72.0426	-96.042	42	7	0	2798	0	9	16
N-S	-2.3986	6.8397	-91.3736	-86.9325	34	1	2	3813	0	7	11
N-C	0.0	-31.8149	-150.879	-182.6939	65	5	2	5837	2	29	28
N-I	0.0	0.0	-5.1653	-5.1653	8	0	0	264	0	0	2
Q-H	0.0	0.0	-12.5162	-12.5162	11	0	0	827	0	2	5
R-U	0.0	-3.0878	-4.4071	-7.4949	11	0	0	392	0	5	6
R-F	-26.6254	19.0511	-208.042	-215.6163	66	4	3	7484	0	15	29
U-G	-11.0504	0.0	-35.3056	-46.356	13	2	0	1076	0	0	5
B-C	0.0	0.0	-0.0007	-0.0007	2	0	0	2	0	0	0
B-E	0.0	0.0	-0.0635	-0.0635	5	0	0	14	0	2	4
B-H	0.0	0.0	-0.002	-0.002	2	0	0	1	0	0	2
C-D	0.0	0.0	-0.5144	-0.5144	4	0	0	82	0	0	5
C-E	-2.4183	-2.1486	-71.1303	-75.6971	35	4	1	3097	0	11	16
D-E	-6.3555	-13.0439	-75.7261	-95.1255	45	2	0	2889	1	13	10
E-H	-10.0715	-13.9795	-114.729	-138.78	52	1	3	4325	1	15	15
G-I	-2.1045	4.1841	-58.0305	-55.9508	38	2	1	2596	0	12	14

Interface residues

• J-N: ALA61J, ALA87N, ALA98N, ARG48J, ARG62J, ARG68J, ARG68N, ARG80N, ARG84N, ASP14J, ASP63J, GLN64J, GLU47J, GLU66J, GLU85N, GLY71N, GLY94N, GLY95J, HIS56J, HIS70J, ILE53J, ILE67J, ILE81N, ILE92N, LEU17J, LEU52J, LEU73N, LEU95N, LYS46J, LYS59J, LYS75N, LYS82N, LYS96N, LYS97N, MET88N, PHE13J, PHE49J, PHE76N, PRO55J, PRO93N, SER54J, SER79N, SER99N, THR44J, THR50J, THR69J, TRP100N, TYR65J, VAL51J, VAL57J, VAL83N
• J-C: ALA12J, ALA23C, ALA60C, ALA61J, ALA93J, ALA94J, ARG16J, ARG45J, ARG58C, ASN24C, ASP14J, ASP60J, ASP63J, ASP97J, GLN2C, GLU47J, GLU57C, GLY12C, GLY1C, GLY95J, HIS15J, HIS5C, HIS70J, ILE13C, ILE18J, ILE53J, ILE67J, LEU10J, LEU17J, LEU71J, LEU92J, LYS11J, LYS3C, LYS61C, PHE13J, PHE22C, PHE28C, PHE49J, PRO59C, SER19C, THR20C, THR25C, THR69J, TRP17C, TRP21C, VAL4C, VAL96J, VAL98J
• J-I: ALA61J, ARG112I, ARG48J, ARG62J, ASP60J, ASP63J, GLN64J, GLU66J, GLY116I, ILE53J, LEU117I, LEU52J, LYS113I, LYS114I, LYS59J, PHE49J, THR50J, TYR65J, VAL115I, VAL51J
• K-R: ARG62R, ARG72R, ASN118K, ASP111K, ASP71R, GLU34R, GLY36R, HIS117K, HIS73R, ILE115K, LYS37R, LYS86K, PRO114K, PRO116K, PRO68R, SER35R, THR110K, THR113K, THR70R, TYR63R, TYR69R, VAL112K
• K-U: ALA101K, ALA29U, ARG105K, ARG121K, ARG126K, ARG127K, ARG32U, ARG33U, ARG34U, ARG6U, ARG92K, ARG97K, ASN100K, ASN108K, ASN118K, ASN8U, ASP111K, ASP12U, CYS120K, GLU30U, GLU35U, GLU7U, GLU82K, GLU93K, GLU9U, GLY26U, GLY87K, GLY89K, HIS117K, ILE106K, ILE109K, ILE115K, ILE3U, ILE96K, LEU28U, LYS124K, LYS125K, LYS4U, MET84K, PHE11U, PHE26K, PHE36U, PRO10U, PRO114K, PRO116K, PRO122K, PRO123K, PRO88K, THR107K, THR110K, THR113K, VAL128K, VAL13U, VAL27U, VAL31U, VAL5U, VAL83K, VAL85K
• K-G: ALA144G, ALA146G, ALA149G, ALA151G, ALA61K, ALA62K, ARG142G, ARG52K, ARG55K, ARG97K, ASN147G, GLN63K, GLU145G, GLY50K, LYS148G, MET143G, PHE150G, PHE51K, PHE60K, PRO59K, PRO87G, PRO90K, SER54K, SER57K, THR58K, VAL64K
• L-Q: ARG11L, ARG13L, ARG39Q, ARG8L, ASN4L, GLN5L, GLY34Q, HIS30Q, ILE32Q, ILE37Q, LEU6L, LYS29Q, LYS35Q, LYS9L, PHE36Q, PRO10L, PRO31Q, THR2L, TYR33Q, VAL3L, VAL7L
• L-H: ARG79H, ASN4L, GLY81H, ILE84H, LEU82H, THR2L, VAL3L, VAL7L
• M-S: ALA74S, ARG35S, ARG77S, ARG78M, ARG80S, ARG86M, ARG89M, ARG91M, ARG92M, ASP63S, ASP81M, CYS84M, GLU64S, GLU72S, GLY67S, GLY71S, GLY83M, GLY87M, HIS68S, ILE39S, LEU70S, LEU79M, LEU82M, LEU88M, LEU94M, LYS102M, LYS109M, LYS113M, LYS69S, MET65S, MET80M, PHE73S, PRO41S, PRO75S, THR101M, THR62S, THR76S, TYR79S, TYR85M, VAL59S, VAL61S, VAL66S
• N-S: ALA35N, ALA43N, ARG36S, ARG40N, ARG52N, ASN34N, ASN42N, ASP11S, ASP32N, GLN48N, GLU19S, GLY7S, HIS13S, ILE10S, LEU12S, LEU15S, LEU45N, LEU47N, LEU4S, LEU50N, LYS16S, LYS27N, LYS46N, LYS5S, LYS6S, PHE40S, PHE9S, PRO51N, PRO8S, SER31N, SER3S, THR49N, TRP41N, VAL33N
• N-C: ALA23C, ALA29C, ALA86N, ALA87N, ARG39C, ARG53C, ARG64N, ARG74N, ARG84N, ARG89N, ASN184C, ASN18C, ASN24C, ASN31C, ASN7C, ASP30C, ASP33C, ASP35C, GLN40C, GLN65N, GLU27C, GLU85N, GLU91N, GLY12C, GLY77N, GLY8C, GLY90N, GLY94N, HIS5C, ILE54C, ILE56C, ILE92N, ILE9C, LEU11C, LEU32C, LEU73N, LEU78N, LEU95N, LYS15C, LYS26C, LYS37C, LYS3C, LYS75N, LYS96N, LYS97N, MET88N, PHE22C, PHE28C, PHE36C, PHE72N, PHE76N, PRO16C, PRO6C, PRO93N, SER19C, SER34C, THR185C, THR20C, THR25C, TRP17C, TRP21C, TYR183C, VAL4C, VAL55C, VAL83N
• N-I: ALA98N, ARG112I, GLU111I, LYS114I, LYS97N, SER99N, TRP100N, VAL115I
• Q-H: ARG83H, GLY34Q, GLY81H, ILE84H, LEU82H, LYS29Q, LYS35Q, PHE36Q, PRO80H, TYR33Q, TYR85H
• R-U: ARG32U, ASP71R, GLU34R, GLY36R, ILE3U, LEU28U, LYS37R, LYS4U, SER35R, THR33R, VAL31U
• R-F: ALA26R, ALA48F, ALA57F, ALA57R, ALA61R, ALA95F, ALA99F, ARG38F, ARG45F, ARG56R, ARG60R, ARG62R, ARG72R, ARG79F, ARG86F, ARG91F, ASN52F, ASN63F, ASP21R, ASP24R, ASP71R, GLN46F, GLU5F, GLU98F, HIS3F, HIS55F, HIS73R, ILE20R, ILE25R, ILE51F, ILE6F, ILE85F, LEU28R, LEU47F, LEU54F, LEU61F, LEU64R, LEU66R, LEU67R, LYS23R, LYS29R, LYS53F, LYS59R, LYS93F, MET88F, MET90F, MET9F, PHE8F, PRO50F, PRO68R, SER100F, SER65R, SER87F, THR27R, THR70R, THR97F, TRP42F, TYR22R, TYR49F, TYR4F, TYR59F, TYR63R, TYR69R, VAL7F, VAL89F, VAL96F
• U-G: ARG16U, ARG17U, ARG20U, ARG78G, GLY26U, GLY80G, GLY81G, LYS24U, SER82G, THR83G, TYR84G, VAL27U, VAL79G
• B-C: ARG178C, LEU128B
• B-E: ASN177B, ASN69E, LEU178B, LYS104B, LYS65E
• B-H: ALA19H, PRO28B
• C-D: ARG130C, ARG131C, ARG46D, MET128C
• C-E: ALA132C, ALA162C, ALA57E, ARG130C, ARG131C, ARG135C, ARG163C, ARG168C, ARG19E, ARG28E, ARG53E, GLN60E, GLU151C, GLU160C, GLU165C, GLU169C, GLU54E, ILE161C, ILE29E, LYS134C, LYS149C, LYS51E, MET128C, MET133C, PHE129C, PHE30E, PHE32E, PRO56E, THR164C, TRP166C, TYR167C, VAL137C, VAL150C, VAL152C, VAL55E
• D-E: ALA106E, ALA78D, ALA79D, ARG111E, ARG46D, ASN121E, ASN195D, ASN84D, ASN88D, ASP49D, GLN53D, GLU100E, GLU115E, GLU196D, GLU201D, GLU87D, GLY101E, GLY103E, GLY107E, GLY108E, GLY83D, GLY86D, HIS120E, HIS197D, ILE104E, ILE105E, ILE59E, LEU114E, LEU14E, LEU198D, LEU202D, LEU81D, LYS205D, LYS82D, PRO56E, SER204D, SER99E, THR102E, THR85D, TYR50D, TYR75D, VAL119E, VAL17E, VAL200D, VAL55E
• E-H: ALA101H, ALA129H, ALA153E, ALA154E, ALA69H, ALA96H, ARG113H, ARG156E, ASN145E, ASN147E, GLN66H, GLN81E, GLN96E, GLU144E, GLU150E, GLU41H, GLU42H, GLU72H, GLY157E, GLY43H, GLY97H, GLY99H, HIS82E, ILE100H, LEU98H, LYS155E, LYS158E, LYS40H, LYS63H, LYS68H, LYS85E, LYS93H, MET146E, MET151E, MET95E, MET95H, PHE44H, PHE65H, PHE94E, PRO149E, PRO83E, PRO97E, SER148E, SER73H, TYR64H, VAL128H, VAL152E, VAL38H, VAL70H, VAL71H, VAL84E, VAL94H
• G-I: ALA23G, ALA38G, ALA43I, ARG108I, ARG40I, ARG44I, ARG48I, ARG79I, ARG9G, ASP106I, ASP14G, GLN49I, GLN8G, GLU39G, GLU41I, GLU52I, GLY18G, ILE11G, ILE41G, LEU12G, LYS10G, LYS12I, LYS16G, LYS34G, LYS35G, MET45I, PHE17G, PRO13G, PRO15G, SER36G, SER40G, SER72I, THR37G, THR42I, TYR43G, VAL26G, VAL46I, VAL47I