3FEM

structure of the synthase subunit pdx1.1 (snz1) of plp synthase from saccharomyces cerevisiae

• Total interactions analyzed: 15
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-F
  • Int. Res.: 104
  • Norm. En. per Res.: -4.1495
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-47.8121	-65.3869	-288.408	-401.607	103	12	12	12621	4	35	36
A-F	-63.3181	-71.274	-296.96	-431.5521	104	16	12	13062	5	37	37
B-C	-57.4475	-71.3841	-300.283	-429.1146	105	18	12	12694	6	36	37
C-D	-53.9934	-66.2441	-280.104	-400.3416	106	13	11	12569	4	33	36
D-E	-44.1208	-68.5654	-277.271	-389.9572	101	13	11	12446	5	34	35
E-F	-53.5459	-67.6305	-286.734	-407.9104	104	13	11	12617	4	35	36

Interface residues

• A-B: ALA109B, ALA216A, ALA219A, ALA221A, ALA222A, ALA254A, ALA89B, ALA94B, ARG164A, ARG165A, ARG246A, ARG59B, ARG82B, ASN260A, ASP110B, ASP155A, ASP220A, ASP259A, ASP270A, ASP62B, CYS58B, GLN226A, GLN90B, GLU104B, GLU116B, GLU158A, GLU168A, GLU266A, GLU273A, GLU281A, GLU45B, GLU88B, GLU93B, GLU96B, GLY152A, GLY154A, GLY214A, GLY228A, GLY272A, GLY276A, GLY277A, GLY55B, GLY84B, HIS113B, HIS114B, HIS257A, HIS85B, ILE115B, ILE280A, ILE66B, ILE83B, ILE91B, ILE92B, LEU106B, LEU223A, LEU224A, LEU227A, LEU264A, LEU265A, LEU271A, LEU274A, LEU95B, LYS119B, LYS161A, LYS263A, LYS56B, LYS64B, LYS67B, MET225A, MET275A, MET51B, MET60B, MET65B, MET70B, PHE120B, PHE258A, PHE86B, PRO108B, PRO218A, PRO261A, PRO63B, SER157A, SER262A, SER268A, SER269A, SER279A, SER282A, SER54B, SER61B, THR107B, THR112B, THR153A, THR217A, TRP111B, VAL156A, VAL160A, VAL215A, VAL267A, VAL278A, VAL57B, VAL81B, VAL87B, VAL97B
• A-F: ALA109A, ALA159F, ALA216F, ALA219F, ALA221F, ALA222F, ALA254F, ALA89A, ALA94A, ARG164F, ARG165F, ARG246F, ARG59A, ARG82A, ASN260F, ASP110A, ASP155F, ASP220F, ASP259F, ASP270F, ASP62A, CYS58A, GLN226F, GLN90A, GLU104A, GLU116A, GLU158F, GLU168F, GLU266F, GLU273F, GLU281F, GLU45A, GLU88A, GLU93A, GLU96A, GLY152F, GLY154F, GLY214F, GLY228F, GLY272F, GLY276F, GLY277F, GLY55A, GLY84A, HIS113A, HIS114A, HIS85A, ILE115A, ILE280F, ILE66A, ILE83A, ILE91A, ILE92A, LEU106A, LEU223F, LEU224F, LEU227F, LEU264F, LEU265F, LEU271F, LEU274F, LEU95A, LYS119A, LYS161F, LYS263F, LYS53A, LYS56A, LYS64A, LYS67A, MET225F, MET275F, MET51A, MET60A, MET65A, MET70A, PHE120A, PHE258F, PHE86A, PRO108A, PRO218F, PRO261F, PRO63A, SER157F, SER262F, SER268F, SER269F, SER279F, SER282F, SER54A, SER61A, THR107A, THR112A, THR153F, THR217F, TRP111A, VAL156F, VAL160F, VAL215F, VAL267F, VAL278F, VAL57A, VAL81A, VAL87A, VAL97A
• B-C: ALA109C, ALA159B, ALA216B, ALA219B, ALA221B, ALA222B, ALA254B, ALA89C, ALA94C, ARG164B, ARG165B, ARG246B, ARG52C, ARG59C, ARG82C, ASN260B, ASP110C, ASP155B, ASP220B, ASP259B, ASP270B, ASP62C, CYS58C, GLN226B, GLN90C, GLU104C, GLU116C, GLU158B, GLU168B, GLU266B, GLU273B, GLU281B, GLU45C, GLU88C, GLU93C, GLU96C, GLY152B, GLY154B, GLY214B, GLY228B, GLY272B, GLY276B, GLY277B, GLY55C, GLY84C, HIS113C, HIS114C, HIS85C, ILE115C, ILE280B, ILE66C, ILE83C, ILE91C, ILE92C, LEU106C, LEU223B, LEU224B, LEU227B, LEU247B, LEU264B, LEU265B, LEU271B, LEU274B, LEU95C, LYS161B, LYS263B, LYS53C, LYS56C, LYS64C, LYS67C, MET225B, MET275B, MET51C, MET60C, MET65C, MET70C, PHE120C, PHE258B, PHE86C, PRO108C, PRO218B, PRO261B, PRO63C, SER157B, SER262B, SER268B, SER269B, SER279B, SER282B, SER54C, SER61C, THR107C, THR112C, THR153B, THR217B, TRP111C, VAL156B, VAL160B, VAL215B, VAL267B, VAL278B, VAL57C, VAL81C, VAL87C, VAL97C
• C-D: ALA109D, ALA159C, ALA216C, ALA219C, ALA221C, ALA222C, ALA254C, ALA89D, ALA94D, ARG164C, ARG165C, ARG246C, ARG52D, ARG59D, ARG82D, ASN260C, ASP110D, ASP155C, ASP220C, ASP259C, ASP270C, ASP62D, CYS58D, GLN226C, GLN90D, GLU104D, GLU116D, GLU158C, GLU168C, GLU266C, GLU273C, GLU281C, GLU45D, GLU88D, GLU93D, GLU96D, GLY152C, GLY154C, GLY214C, GLY228C, GLY272C, GLY276C, GLY277C, GLY55D, GLY84D, HIS113D, HIS114D, HIS257C, HIS85D, ILE115D, ILE163C, ILE280C, ILE66D, ILE83D, ILE91D, ILE92D, LEU106D, LEU223C, LEU224C, LEU227C, LEU264C, LEU265C, LEU271C, LEU274C, LEU95D, LYS119D, LYS161C, LYS263C, LYS53D, LYS56D, LYS64D, LYS67D, MET225C, MET275C, MET51D, MET60D, MET65D, MET70D, PHE120D, PHE258C, PHE86D, PRO108D, PRO218C, PRO261C, PRO63D, SER157C, SER262C, SER268C, SER269C, SER279C, SER282C, SER54D, SER61D, THR107D, THR112D, THR153C, THR217C, TRP111D, VAL156C, VAL160C, VAL215C, VAL267C, VAL278C, VAL57D, VAL87D, VAL97D
• D-E: ALA109E, ALA216D, ALA219D, ALA221D, ALA222D, ALA254D, ALA89E, ALA94E, ARG164D, ARG165D, ARG246D, ARG52E, ARG59E, ARG82E, ASN260D, ASP110E, ASP155D, ASP220D, ASP259D, ASP270D, ASP62E, CYS58E, GLN226D, GLN90E, GLU104E, GLU116E, GLU158D, GLU168D, GLU266D, GLU273D, GLU281D, GLU45E, GLU88E, GLU93E, GLU96E, GLY152D, GLY154D, GLY214D, GLY228D, GLY272D, GLY276D, GLY277D, GLY55E, GLY84E, HIS113E, HIS114E, HIS85E, ILE115E, ILE280D, ILE66E, ILE83E, ILE91E, ILE92E, LEU106E, LEU223D, LEU224D, LEU227D, LEU264D, LEU265D, LEU271D, LEU274D, LEU95E, LYS161D, LYS263D, LYS56E, LYS64E, LYS67E, MET225D, MET275D, MET51E, MET60E, MET65E, MET70E, PHE120E, PHE258D, PHE86E, PRO108E, PRO218D, PRO261D, PRO63E, SER157D, SER262D, SER268D, SER269D, SER279D, SER282D, SER54E, SER61E, THR107E, THR112E, THR153D, THR217D, TRP111E, VAL156D, VAL160D, VAL215D, VAL267D, VAL278D, VAL57E, VAL87E, VAL97E
• E-F: ALA109F, ALA159E, ALA216E, ALA219E, ALA221E, ALA222E, ALA254E, ALA89F, ALA94F, ARG164E, ARG165E, ARG246E, ARG59F, ARG82F, ASN260E, ASP110F, ASP155E, ASP220E, ASP259E, ASP270E, ASP62F, CYS58F, GLN226E, GLN90F, GLU104F, GLU116F, GLU158E, GLU168E, GLU266E, GLU273E, GLU281E, GLU45F, GLU88F, GLU93F, GLU96F, GLY152E, GLY154E, GLY214E, GLY228E, GLY272E, GLY276E, GLY277E, GLY55F, GLY84F, HIS113F, HIS114F, HIS85F, ILE115F, ILE280E, ILE66F, ILE83F, ILE91F, ILE92F, LEU106F, LEU223E, LEU224E, LEU227E, LEU264E, LEU265E, LEU271E, LEU274E, LEU95F, LYS119F, LYS161E, LYS263E, LYS53F, LYS56F, LYS64F, LYS67F, MET225E, MET275E, MET51F, MET60F, MET65F, MET70F, PHE120F, PHE258E, PHE86F, PRO108F, PRO218E, PRO261E, PRO63F, SER157E, SER262E, SER268E, SER269E, SER279E, SER282E, SER54F, SER61F, THR107F, THR112F, THR153E, THR217E, TRP111F, VAL156E, VAL160E, VAL215E, VAL267E, VAL278E, VAL57F, VAL81F, VAL87F, VAL97F