3E47
crystal structure of the yeast 20s proteasome in complex with homobelactosin c
Total interactions analyzed 378
Total true interactions 98
Strongest Interaction Chains N-2
Int. Res. 54
Norm. En. per Res. -4.8587
Hub Node A(8)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -37.8659 -12.4979 -406.265 -456.6288 136 20 7 15680 1 23 22
A-C 0.0 -10.7259 -16.4536 -27.1795 12 0 1 609 0 2 2
A-D 0.0 0.0 -1.7708 -1.7708 5 0 0 111 0 2 1
A-E 0.0 0.0 -3.0751 -3.0751 9 3 0 395 0 1 0
A-F 0.0 0.0 -27.3341 -27.3341 16 1 0 1093 0 0 2
A-G -53.4826 -27.2922 -405.92 -486.6948 130 19 14 15560 2 22 26
A-H -44.6139 -26.9892 -153.329 -224.9321 67 12 3 6137 3 17 16
A-I -13.1372 3.4022 -128.16 -137.895 54 0 2 4932 2 16 21
B-C -64.935 21.1375 -511.788 -555.5855 145 55 9 19006 1 32 37
B-D 0.0 -20.6485 -23.4244 -44.0729 14 0 0 913 2 8 5
B-E -4.3901 -13.7423 -26.443 -44.5753 15 6 0 898 0 4 2
B-F 0.0 0.0 -23.7173 -23.7173 17 0 0 1024 0 1 0
B-G 0.0 3.9125 -35.4399 -31.5274 15 0 2 1150 0 2 5
B-H 0.0 11.5044 -1.6124 9.892 9 0 0 114 0 5 4
B-I -8.6748 -5.6035 -115.595 -129.8733 50 4 1 4859 0 17 18
B-J -12.5165 -31.1801 -137.295 -180.9915 47 7 2 4650 3 21 23
C-D -68.9884 -46.9084 -397.558 -513.4548 121 25 9 14618 1 28 30
C-E 0.0 0.0 -0.0517 -0.0517 3 0 0 19 0 1 0
C-J -15.1863 -16.1178 -90.3893 -121.6934 43 3 2 3902 2 17 13
C-K -25.8391 -37.487 -54.4192 -117.7453 33 1 1 2520 8 29 24
D-E -44.4075 -40.0373 -272.213 -356.6578 118 10 7 11605 2 32 36
D-G 0.0 0.0 -0.0195 -0.0195 2 0 0 8 0 0 0
D-K -20.7851 -58.5676 -83.6934 -163.0461 48 9 1 4193 6 25 26
D-L -7.998 -38.6975 -135.945 -182.6404 53 4 0 4714 4 31 29
E-F -72.0565 -25.9291 -393.756 -491.7415 133 24 11 14716 2 31 34
E-G 0.0 0.0 -0.006 -0.006 2 0 0 5 0 0 0
E-L -12.1647 -19.1232 -73.2218 -104.5097 42 6 0 2989 1 13 18
E-M -3.7859 -25.7773 -140.699 -170.2622 54 3 3 5345 2 28 11
F-G -82.1419 -23.9565 -409.061 -515.1594 133 19 9 15329 3 26 26
F-M -18.0338 -74.1589 -92.1497 -184.3424 54 5 2 3763 6 32 22
F-N -17.663 -21.39 -101.566 -140.6191 53 2 2 4545 3 14 10
G-H -20.4477 -75.8884 -164.705 -261.0411 60 10 1 6104 11 14 22
G-N -11.0381 -47.9587 -73.4542 -132.451 48 3 4 3581 2 13 16
G-1 0.0 0.0 -12.5742 -12.5742 13 1 0 529 0 3 4
H-I -113.0156 -142.6022 -385.117 -640.7348 147 21 14 15399 11 42 35
H-N -26.5922 -39.2329 -95.4873 -161.3124 63 4 3 3868 3 15 6
H-Y 0.0 0.0 -10.5554 -10.5554 7 1 1 502 0 0 0
H-Z -90.5778 -65.1761 -364.138 -519.8919 111 20 5 14405 4 35 39
H-1 -4.7959 -39.9423 -195.665 -240.4032 89 7 5 9039 1 20 19
I-J -9.1921 -57.3113 -109.721 -176.2244 71 4 4 5600 4 13 11
I-Y -84.0297 -51.0134 -261.63 -396.6731 89 11 4 9889 5 20 20
I-Z -35.5814 -34.0676 -159.95 -229.5989 72 14 1 7327 3 19 20
J-K -50.3194 -40.3446 -155.491 -246.155 71 17 4 6389 3 22 21
J-X -25.3726 -9.0575 -154.68 -189.1101 56 10 2 6439 2 16 30
J-Y -26.7308 -35.918 -201.438 -264.0868 76 13 1 7782 5 18 18
K-L -65.439 -28.553 -176.556 -270.548 82 8 4 6100 3 24 17
K-V 0.0 0.0 -10.8766 -10.8766 7 1 1 512 0 0 0
K-W -81.0638 -50.4774 -267.647 -399.1882 91 13 4 10025 5 20 20
K-X -30.7521 -35.8354 -197.28 -263.8675 76 13 1 7807 5 18 18
L-M -49.2681 9.6436 -225.35 -264.9744 91 14 5 9435 11 28 23
L-V -79.7646 -64.3033 -363.28 -507.3478 113 19 5 14443 4 34 40
L-W -34.8806 -34.1885 -162.599 -231.6681 73 16 1 7369 3 19 20
M-N -14.059 -21.8292 -134.469 -170.3572 66 6 1 5870 2 22 14
M-U 0.0 0.0 -11.66 -11.66 13 1 0 523 0 3 4
M-V -6.9446 -40.558 -195.871 -243.3736 89 9 5 8968 1 20 19
M-2 -124.3642 27.513 -387.328 -484.1792 113 18 11 14154 4 30 31
N-1 -123.5027 27.8476 -388.176 -483.8311 113 18 10 14170 4 31 31
N-2 -55.2433 -19.9883 -187.137 -262.3686 54 24 3 6788 4 12 11
O-P -38.341 -13.1459 -417.279 -468.7659 136 27 7 16112 1 23 22
O-Q 0.0 -11.478 -20.5174 -31.9954 13 0 1 663 0 2 2
O-R -8.308 0.0 -2.332 -10.64 5 0 0 138 0 2 1
O-S 0.0 0.0 -6.2267 -6.2267 10 3 0 385 0 1 0
O-T -2.4677 0.0 -25.7072 -28.1749 16 2 0 1055 0 0 1
O-U -62.3469 -26.608 -424.4 -513.355 132 23 14 16090 2 22 25
O-V -44.4545 -26.8328 -152.558 -223.8452 67 11 3 6072 3 17 15
O-W -11.0659 3.0484 -126.566 -134.5835 55 0 2 4872 2 16 20
P-Q -39.8328 7.8715 -435.84 -467.8013 140 21 6 17321 1 31 35
P-R 0.0 -20.7179 -30.095 -50.8129 14 3 0 970 2 8 6
P-S -3.9564 -12.7993 -23.4729 -40.2287 13 3 0 797 0 4 2
P-T 0.0 0.0 -22.1587 -22.1587 17 0 0 976 0 1 0
P-U 0.0 4.2436 -42.361 -38.1174 17 2 2 1280 0 2 5
P-V 0.0 10.4919 -2.1033 8.3886 10 0 0 132 0 5 4
P-W -7.7843 -5.5596 -110.893 -124.2369 51 4 0 4732 0 17 18
P-X -14.4013 -30.9083 -137.793 -183.1026 47 11 3 4724 3 21 23
Q-R -65.3239 -40.3613 -380.689 -486.3742 121 25 9 14409 1 26 26
Q-S 0.0 0.0 -0.0405 -0.0405 3 0 0 16 0 1 0
Q-X -15.2249 -16.161 -85.8667 -117.2526 43 3 2 3823 2 17 13
Q-Y -25.1957 -36.8849 -53.8437 -115.9242 33 1 1 2471 8 29 24
R-S -72.3277 -48.2032 -322.313 -442.8439 122 26 7 12718 3 35 37
R-U 0.0 0.0 -0.0298 -0.0298 2 0 0 9 0 0 0
R-Y -17.6198 -57.4572 -82.1797 -157.2567 48 10 1 4123 6 25 26
R-Z -5.7248 -39.6106 -135.345 -180.6804 52 4 0 4759 4 31 30
S-T -75.0088 -26.3307 -403.375 -504.7145 135 22 12 14957 2 31 34
S-U 0.0 0.0 -0.0008 -0.0008 2 0 0 2 0 0 0
S-Z -12.3986 -20.8085 -77.5604 -110.7675 43 7 0 3124 2 13 18
S-1 -3.532 -25.6184 -139.714 -168.8645 54 3 3 5386 2 28 11
T-U -78.2533 -24.5386 -398.639 -501.4309 135 22 9 15234 3 26 26
T-1 -21.0075 -75.2079 -96.9681 -193.1835 54 6 2 3850 6 32 22
T-2 -16.928 -21.8169 -101.488 -140.2329 53 3 2 4520 3 14 10
U-V -19.2952 -76.0427 -164.693 -260.0309 60 11 1 6022 11 14 21
U-2 -5.9605 -45.0295 -71.5683 -122.5582 48 3 4 3486 2 13 16
V-W -115.8787 -144.8115 -386.066 -646.7562 147 24 14 15468 11 43 35
V-2 -24.2118 -37.0207 -92.1089 -153.3414 63 1 3 3804 3 15 6
W-X -8.5097 -55.586 -113.101 -177.1967 71 4 4 5666 4 13 11
X-Y -51.0117 -39.6665 -156.523 -247.2012 71 17 4 6407 3 21 21
Y-Z -62.9222 -28.7949 -171.408 -263.1251 80 7 4 6032 3 24 17
Z-1 -51.0386 -22.5695 -230.336 -303.9441 91 15 5 9578 11 28 23
1-2 -12.8025 -21.5611 -132.216 -166.5796 66 3 1 5894 2 22 14