3DY4
crystal structure of yeast 20s proteasome in complex with spirolactacystin
Total interactions analyzed 378
Total true interactions 98
Strongest Interaction Chains H-I
Int. Res. 141
Norm. En. per Res. -5.1157
Hub Node A(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -47.6996 -14.9933 -435.855 -498.5478 135 19 7 16011 1 23 21
A-C 0.0 -12.4871 -18.5543 -31.0414 12 0 1 639 0 2 2
A-D 0.0 0.0 -2.2635 -2.2635 5 0 0 113 0 2 1
A-E 0.0 0.0 -6.3401 -6.3401 10 6 0 462 0 1 0
A-F -3.1284 0.0 -29.0447 -32.1731 17 2 0 1102 0 0 1
A-G -68.1422 -39.4852 -415.706 -523.3333 131 26 14 16014 3 22 27
A-H -42.016 -27.4867 -157.154 -226.6566 70 11 3 6282 4 18 17
A-I -14.0869 -1.0718 -128.241 -143.3997 54 4 2 4775 2 15 20
B-C -63.1479 28.6095 -520.529 -555.0674 145 39 10 19033 1 34 38
B-D -16.0273 -15.8031 -17.6624 -49.4928 14 3 0 832 3 8 5
B-E 0.0 -5.7955 -22.4546 -28.2501 14 0 0 735 0 4 2
B-F 0.0 0.0 -21.5644 -21.5644 18 0 0 990 0 1 0
B-G 0.0 4.177 -36.0552 -31.8782 16 0 2 1174 0 2 5
B-H 0.0 7.8483 -0.6357 7.2125 7 0 0 62 0 3 4
B-I -10.3923 -6.1443 -113.675 -130.2115 48 3 0 4885 0 16 16
B-J -15.2127 -33.4697 -135.938 -184.6205 47 13 2 4697 3 21 22
C-D -75.8477 -43.5527 -382.538 -501.9384 119 27 8 14479 2 26 29
C-E 0.0 0.0 -0.0757 -0.0757 3 0 0 21 0 1 0
C-J -14.1387 -14.093 -93.7123 -121.944 45 6 2 4033 2 17 13
C-K -30.6634 -40.2668 -62.0676 -132.9978 35 1 1 2572 8 30 25
D-E -32.519 -41.3121 -289.076 -362.9071 116 21 7 11956 1 35 32
D-G 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
D-K -12.4501 -50.4181 -94.6298 -157.4981 50 8 1 4244 6 26 26
D-L -20.7284 -47.3946 -128.018 -196.1411 47 2 0 4328 2 31 25
E-F -71.481 -28.9323 -410.292 -510.7054 133 15 11 15008 2 30 34
E-G 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
E-L -10.2881 -21.0893 -78.4893 -109.8667 41 8 0 3108 1 13 19
E-M -2.2531 -21.4119 -142.889 -166.554 55 3 3 5182 2 28 13
F-G -93.198 -22.25 -431.298 -546.7461 131 22 9 15552 4 26 26
F-M -23.4263 -72.4423 -93.7462 -189.6148 55 7 2 3966 6 32 22
F-N -16.5312 -19.7329 -106.254 -142.518 51 1 3 4565 3 14 10
G-H -23.0578 -74.9394 -183.306 -281.3032 60 6 1 6298 11 14 21
G-N -13.5309 -32.049 -81.1953 -126.7751 47 3 4 3625 2 14 15
G-1 -3.151 0.0 -11.1433 -14.2943 13 2 0 512 0 3 4
H-I -157.2299 -156.2446 -407.833 -721.3075 141 24 15 15711 12 43 34
H-N -32.8484 -43.3684 -98.7779 -174.9947 64 2 2 3766 3 16 6
H-Y 0.0 0.0 -11.5688 -11.5688 7 0 1 581 0 0 0
H-Z -92.2088 -69.4628 -384.358 -546.0296 114 22 6 14518 4 34 38
H-1 -3.8161 -44.1104 -205.87 -253.7965 92 6 5 9075 1 21 18
I-J -9.4514 -24.4038 -106.417 -140.2722 71 3 4 5428 4 12 11
I-Y -80.7891 -51.6529 -259.479 -391.921 92 14 5 9716 4 20 20
I-Z -36.2253 -32.5993 -192.705 -261.5296 72 15 1 7559 3 19 20
J-K -40.9288 -31.73 -143.89 -216.5488 65 16 4 6094 3 21 20
J-X -51.4193 -0.7933 -148.907 -201.1195 58 20 4 6861 0 18 30
J-Y -33.3679 -46.9467 -186.656 -266.9706 79 12 1 7627 6 19 19
K-L -61.9326 -33.0459 -170.736 -265.7145 79 8 4 6004 3 25 14
K-V 0.0 0.0 -12.221 -12.221 8 0 1 593 0 0 0
K-W -79.8787 -51.8574 -260.579 -392.3151 93 13 5 9767 4 20 20
K-X -32.4435 -45.9839 -186.677 -265.1044 80 12 1 7734 6 19 19
L-M -58.0755 13.3162 -225.953 -270.7123 90 12 5 9397 10 27 22
L-V -85.0117 -61.9996 -388.229 -535.2403 114 21 5 14585 4 34 38
L-W -36.0879 -32.3351 -193.19 -261.613 73 15 1 7599 3 19 20
M-N -13.6622 -22.2604 -133.229 -169.1516 64 4 1 5797 2 22 15
M-U 0.0 0.0 -10.7206 -10.7206 13 2 0 500 0 3 4
M-V -6.2128 -45.2444 -203.92 -255.3772 92 6 5 9086 1 21 18
M-2 -133.2898 26.7784 -388.611 -495.1224 112 20 9 14185 4 27 30
N-1 -134.1103 28.1058 -393.73 -499.7346 112 22 9 14286 4 29 31
N-2 -48.1492 -23.8405 -170.493 -242.4828 54 22 3 6610 4 12 11
O-P -51.4675 -16.824 -443.751 -512.0425 136 31 7 16424 1 23 22
O-Q 0.0 -13.4342 -21.2106 -34.6448 14 0 1 681 0 2 2
O-R -6.7154 0.0 -2.4799 -9.1953 5 0 0 136 0 2 1
O-S 0.0 0.0 -11.727 -11.727 10 6 0 452 0 1 0
O-T 0.0 0.0 -24.5018 -24.5018 16 1 0 1000 0 0 1
O-U -75.0005 -38.6238 -437.92 -551.5443 132 33 14 16647 3 23 28
O-V -42.6424 -27.8257 -163.348 -233.8162 71 11 3 6295 4 18 18
O-W -13.1558 -1.9869 -122.584 -137.7267 53 3 2 4649 2 15 20
P-Q -63.9165 20.9884 -472.183 -515.1111 141 31 9 18042 1 33 36
P-R -15.3333 -16.0271 -23.0693 -54.4297 14 3 0 880 3 8 6
P-S 0.0 -5.616 -21.6606 -27.2766 13 1 0 720 0 4 2
P-T 0.0 0.0 -19.3362 -19.3362 18 0 0 932 0 1 0
P-U 0.0 4.1467 -35.3034 -31.1567 17 0 2 1159 0 2 5
P-V 0.0 7.9546 -0.8579 7.0967 8 0 0 81 0 3 4
P-W -4.2067 -6.1534 -114.529 -124.8891 49 6 0 4896 0 17 18
P-X -13.9853 -32.5238 -133.864 -180.3731 49 13 3 4732 3 21 22
Q-R -70.7833 -43.1257 -381.442 -495.3511 119 26 8 14450 2 26 29
Q-S 0.0 0.0 -0.0778 -0.0778 3 0 0 22 0 1 0
Q-X -13.954 -13.7005 -90.0319 -117.6863 44 4 2 3921 2 17 13
Q-Y -29.4347 -38.7057 -56.5951 -124.7355 34 1 1 2500 7 30 24
R-S -37.5723 -40.1328 -304.812 -382.5171 116 18 7 12037 1 35 32
R-U 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
R-Y -13.9069 -49.615 -93.7506 -157.2725 50 7 1 4215 6 26 26
R-Z -18.6155 -47.5921 -127.664 -193.8716 47 2 0 4305 2 31 25
S-T -68.3496 -26.6594 -423.657 -518.666 134 23 10 15221 2 31 34
S-U 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
S-Z -10.1207 -19.409 -79.3093 -108.839 41 7 0 3129 1 13 19
S-1 -2.1265 -21.6586 -145.897 -169.6821 55 3 3 5349 2 29 13
T-U -83.9571 -22.4708 -417.094 -523.5219 132 24 9 15383 4 26 26
T-1 -23.1097 -72.3703 -93.7085 -189.1885 55 7 2 3928 6 31 22
T-2 -13.6402 -20.055 -108.08 -141.7752 51 1 3 4618 2 14 10
U-V -22.756 -74.5775 -181.129 -278.4625 60 7 1 6223 11 14 21
U-2 -12.2076 -31.8474 -81.9942 -126.0493 47 4 4 3612 1 14 15
V-W -154.23 -156.0397 -400.202 -710.4716 139 25 15 15686 12 43 35
V-2 -31.5598 -42.1007 -97.3688 -171.0292 64 2 2 3739 3 16 6
W-X -9.0073 -55.921 -109.707 -174.6353 71 6 4 5506 4 13 11
X-Y -42.4016 -30.6086 -140.149 -213.1592 65 17 4 6044 3 21 20
Y-Z -63.5517 -33.9074 -170.759 -268.218 78 8 4 5957 3 25 13
Z-1 -61.43 13.1164 -226.699 -275.0127 91 13 5 9443 10 27 22
1-2 -13.2338 -22.0286 -132.518 -167.7804 64 3 1 5795 2 22 15