3DMD

structures and conformations in solution of the signal recognition particle receptor from the archaeon pyrococcus furiosus

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 66
  • Norm. En. per Res.: -1.7233
• Hub Node: B(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
B-A	-11.9912	-15.7654	-29.3551	-57.1117	47	1	0	1476	2	49	49
B-C	-3.8374	-15.4001	-62.2671	-81.5046	54	2	0	2868	0	39	42
A-C	-8.4472	10.0527	-115.346	-113.7406	66	2	6	5134	2	38	37

Interface residues

• B-A: ALA100A, ALA100B, ALA69A, ALA69B, ALA96A, ARG109B, ARG232B, ARG256B, ARG84A, ASN259B, ASP289B, ASP68A, ASP68B, GLN76A, GLN76B, GLU103A, GLU103B, GLU106B, GLU260B, GLU65A, GLU65B, GLU72A, GLU72B, GLU95A, GLU99A, GLY80A, ILE104B, LEU37A, LYS228B, LYS263B, LYS73A, LYS73B, LYS75A, LYS77A, LYS77B, LYS81A, LYS82A, SER102A, SER108B, SER285B, THR107B, THR38A, TYR286A, TYR286B, VAL287B, VAL66B, VAL79A
• B-C: ALA261C, ALA290C, ALA63C, ALA69C, ARG109C, ARG232C, ARG256C, ARG35B, ARG84B, ASN237C, ASN259C, ASP265C, ASP289C, ASP34B, ASP68C, GLN76B, GLU103C, GLU106C, GLU23B, GLU260C, GLU26B, GLU40B, GLU43B, GLU65C, GLY31B, GLY80B, ILE104C, ILE288C, ILE36B, LEU32B, LEU33B, LEU64C, LYS228C, LYS235C, LYS263C, LYS30B, LYS42B, LYS44B, LYS73C, LYS75B, LYS82B, PHE258C, SER108C, SER283C, SER285C, THR107C, THR38B, TYR286C, VAL262C, VAL27B, VAL287C, VAL39B, VAL66C, VAL79B
• A-C: ALA188C, ALA191C, ALA192C, ALA194C, ALA197C, ALA203C, ALA231C, ALA250A, ALA60A, ALA63A, ARG204C, ARG221C, ARG232C, ARG256A, ARG277A, ARG71A, ASN220C, ASN222C, ASN249A, ASP189C, ASP196C, ASP225C, ASP47A, ASP51A, ASP56A, ASP61A, ASP68A, GLN199C, GLN254A, GLN257A, GLU218C, GLU253A, GLU52A, GLU54A, GLU59A, GLU65A, GLY187C, GLY248A, HIS184C, HIS200C, ILE182C, ILE198C, ILE230C, ILE251A, ILE55A, LEU50A, LEU53A, LEU57A, LEU58A, LEU64A, LYS202C, LYS228C, LYS229C, LYS235C, LYS48A, PHE162C, PRO190C, SER185C, THR161C, THR219C, THR234C, TYR195C, VAL193C, VAL233C, VAL62A, VAL67A