3DBR
structural dissection of a gating mechanism preventing misactivation of ubiquitin by nedd8's e1 (appbp1- uba3arg190gln-nedd8ala72arg)
Total interactions analyzed 66
Total true interactions 20
Strongest Interaction Chains B-I
Int. Res. 121
Norm. En. per Res. -4.3054
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
Download
Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -114.7351 -138.09 -976.823 -1229.6482 316 68 17 41028 15 77 72
A-I -2.6605 -6.872 -84.2467 -93.7792 59 3 0 3402 1 27 32
A-E -17.4065 -37.8403 -36.2119 -91.4587 29 5 0 1812 5 31 14
B-I -95.1628 -53.5187 -372.268 -520.9494 121 44 6 14996 3 27 21
B-D -43.3721 -74.6381 -157.546 -275.5562 103 12 3 6500 2 36 41
B-E -15.0596 0.282 -104.176 -118.9536 70 7 0 5025 1 18 14
B-F 0.0 -1.0674 -27.0988 -28.1662 23 1 0 1160 0 12 8
C-D -133.1059 -114.2802 -985.126 -1232.5121 313 71 17 40649 17 80 76
C-J -25.3531 -17.3656 -103.006 -145.7247 62 3 0 3891 2 28 35
C-G -3.0727 1.6627 -14.0136 -15.4237 20 0 0 797 2 22 12
C-H 0.0 17.9067 -55.0149 -37.1082 55 2 0 2772 0 13 11
D-J -63.6691 -50.6221 -388.929 -503.2202 119 37 8 15115 3 29 22
D-H 0.0 2.4808 -11.5278 -9.0471 22 1 0 738 0 9 8
E-F -141.5983 -122.5182 -958.927 -1223.0434 319 89 17 41623 16 78 74
E-K -2.3792 -7.5663 -86.7825 -96.728 56 5 0 3276 0 30 29
F-K -51.7774 -49.8345 -389.079 -490.6908 117 24 7 14621 3 27 20
F-H -36.3991 -44.9129 -138.011 -219.323 103 10 3 6499 2 36 38
G-H -126.1035 -73.6629 -931.282 -1131.0483 314 83 16 40363 11 82 72
G-L -18.4471 -17.8172 -79.4823 -115.7466 64 11 0 3603 3 28 27
H-L -62.3682 -54.463 -369.503 -486.3343 120 32 6 14577 3 29 22